Mp3g04880



Description

Annotation

Database ID Description
ProSiteProfiles PS50084 Type-1 KH domain profile.
CDD cd22460 KH-I_PEPPER_rpt2_like
Gene3D G3DSA:3.30.1370.10 K Homology domain, type 1
Pfam PF00013 KH domain
SUPERFAMILY SSF54791 Eukaryotic type KH-domain (KH-domain type I)
CDD cd22459 KH-I_PEPPER_rpt1_like
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.310.210 -
PANTHER PTHR10288 KH DOMAIN CONTAINING RNA BINDING PROTEIN
SMART SM00322 kh_6
CDD cd22462 KH-I_HEN4_like_rpt5
KEGG K21444 poly(rC)-binding protein 3/4
KOG KOG2190 PolyC-binding proteins alphaCP-1 and related KH domain proteins; [AR]
KOG KOG2191 RNA-binding protein NOVA1/PASILLA and related KH domain proteins; C-term missing; [AR]
MapolyID Mapoly0022s0041 -
GO GO:0003723 RNA binding
GO GO:0003676 nucleic acid binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHOS5 RNA-binding KH domain-containing protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g04880.1 chr3:5168026..5179273 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g04880.2 chr3:5168026..5179273 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.