Mp3g06610



Description

Annotation

Database ID Description
Gene3D G3DSA:1.20.245.10 -
Gene3D G3DSA:2.60.60.20 PLAT/LH2 domain
Gene3D G3DSA:3.10.450.60 -
Gene3D G3DSA:4.10.372.10 -
Gene3D G3DSA:4.10.375.10 -
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR11771 LIPOXYGENASE
PRINTS PR00087 Lipoxygenase signature
PRINTS PR00468 Plant lipoxygenase signature
Pfam PF00305 Lipoxygenase
Pfam PF01477 PLAT/LH2 domain
ProSitePatterns PS00711 Lipoxygenases iron-binding region signature 1.
ProSiteProfiles PS50095 PLAT domain profile.
ProSiteProfiles PS51393 Lipoxygenase iron-binding catalytic domain profile.
SMART SM00308 LH2_4
SUPERFAMILY SSF48484 Lipoxigenase
SUPERFAMILY SSF49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
GO GO:0046872 metal ion binding
GO GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO GO:0005515 protein binding
GO GO:0034440 lipid oxidation
GO GO:0016491 oxidoreductase activity
MapolyID Mapoly0006s0130 -

Nomenclature

Gene symbol Product Transcript ID Status
MpLOX3 Lipoxygenase Published

Associated Literature (AI-based literature mining)

Lipoxygenase; Mapoly0006s0130.1 (from nomenclature)

0 core 2 peripheral

Kihara H, Tanaka M, Yamato KT, Horibata A, Yamada A, Kita S, Ishizaki K, Kajikawa M, Fukuzawa H, Kohchi T, Akakabe Y, Matsui K. (2014) · Phytochemistry  research citation background
Lipoxygenase cited as one of three known Marchantia LOX genes (MpLOX1-3) forming 15(S)-hydroperoxide; background to the oxylipin pathway, not assayed here.
Galassi L, Medina-Paz F, Jimenez-Aleman GH. (2026) · Plants (Basel)  review citation background
Liverwort-specific lipoxygenase with 15S-LOX activity, shown by recombinant enzyme assays.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g06610.1 chr3:6917697..6924007 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g06610 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g06610 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.