Mp3g07440



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.420.10 -
SUPERFAMILY SSF53098 Ribonuclease H-like
PANTHER PTHR22891 EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
ProSiteProfiles PS50822 Piwi domain profile.
SMART SM00950 Piwi_a_2
Gene3D G3DSA:3.40.50.2300 -
Pfam PF02171 Piwi domain
KOG KOG1041 Translation initiation factor 2C (eIF-2C) and related proteins; [J]
KOG KOG4090 Uncharacterized conserved protein; C-term missing; [S]
MapolyID Mapoly0006s0218 -
GO GO:0004521 RNA endonuclease activity
GO GO:0003723 RNA binding
GO GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing
GO GO:0005737 cytoplasm
GO GO:0003676 nucleic acid binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPIWIb PIWI, siRNA biogenesis Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g07440.1 chr3:7656332..7662735 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g07440.2 chr3:7656145..7662735 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g07440.3 chr3:7656145..7662735 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.