Database | ID | Description |
---|---|---|
CDD | cd02241 | cupin_OxOx |
PRINTS | PR00325 | Germin signature |
Pfam | PF00190 | Cupin |
PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
SMART | SM00835 | Cupin_1_3 |
Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
SUPERFAMILY | SSF51182 | RmlC-like cupins |
MapolyID | Mapoly0085s0059 | - |
GO | GO:0030145 | manganese ion binding |
GO | GO:0005618 | cell wall |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpCupin50 | Cupin | Provisional |
Sequences: |
Gene UTR + CDS + intron |
>Mp3g09690.1 ATGGGTCGTT TACTACACTC TTCATTCGCT CTGCTAGTTT TCATTGCAGT TGCTCTGACC CTGCAGTCCG TGCAGGCCTC TGATCCAGAA CTCACGAAGG ATTTTCAGGT CCCAGCAGGA ATCAATGCAG CCGATATCGA TGGAACGTTC TTCACCAGCG AGGCCTTGAG GAACGTCATG CCCAACGTGG CTTCACCTTT TGCAACTGTC ACCACAGCTA ATCTGGTTGC ACCAGCAAAG GCTCCATTTC TCGCAGTCGA TGGACTCGGT GTTTCCATGG CTTTGCTTCA GTTTCCTCCT GGCACCGTGA ACCCGCCCCA TACTCACCCT CGTGGAACGG AACTTTTGTT CATTATCGAA GGCACTCTGG ACGTGGGTTT GGTCGATACC ACGAACAAAC TTTTCACCAA CACTCTCTAC AAGGGCGACA TCTTCGCTTT TCCCAAAGGC CTCGTTCATT TCCAGATCAA CAACGACAAG TACAAGACCG TGACGGCACT TGGCGGATTC AGCAGCTCCA ACGCAGGGCT GGTCCGTCTG CCGAATACTC TGTTCAATAC ATCCACGCCA ATCTCTGATA AGGTGCTCCA GATTTCTTTT GGCATATCTG GTGATGTAGT CAAGGCATTG AGAGCTCAAT TCGCTTGA |
mRNA UTR + CDS |
>Mp3g09690.1 ATGGGTCGTT TACTACACTC TTCATTCGCT CTGCTAGTTT TCATTGCAGT TGCTCTGACC CTGCAGTCCG TGCAGGCCTC TGATCCAGAA CTCACGAAGG ATTTTCAGGT CCCAGCAGGA ATCAATGCAG CCGATATCGA TGGAACGTTC TTCACCAGCG AGGCCTTGAG GAACGTCATG CCCAACGTGG CTTCACCTTT TGCAACTGTC ACCACAGCTA ATCTGGTTGC ACCAGCAAAG GCTCCATTTC TCGCAGTCGA TGGACTCGGT GTTTCCATGG CTTTGCTTCA GTTTCCTCCT GGCACCGTGA ACCCGCCCCA TACTCACCCT CGTGGAACGG AACTTTTGTT CATTATCGAA GGCACTCTGG ACGTGGGTTT GGTCGATACC ACGAACAAAC TTTTCACCAA CACTCTCTAC AAGGGCGACA TCTTCGCTTT TCCCAAAGGC CTCGTTCATT TCCAGATCAA CAACGACAAG TACAAGACCG TGACGGCACT TGGCGGATTC AGCAGCTCCA ACGCAGGGCT GGTCCGTCTG CCGAATACTC TGTTCAATAC ATCCACGCCA ATCTCTGATA AGGTGCTCCA GATTTCTTTT GGCATATCTG GTGATGTAGT CAAGGCATTG AGAGCTCAAT TCGCTTGA |
CDS |
>Mp3g09690.1 ATGGGTCGTT TACTACACTC TTCATTCGCT CTGCTAGTTT TCATTGCAGT TGCTCTGACC CTGCAGTCCG TGCAGGCCTC TGATCCAGAA CTCACGAAGG ATTTTCAGGT CCCAGCAGGA ATCAATGCAG CCGATATCGA TGGAACGTTC TTCACCAGCG AGGCCTTGAG GAACGTCATG CCCAACGTGG CTTCACCTTT TGCAACTGTC ACCACAGCTA ATCTGGTTGC ACCAGCAAAG GCTCCATTTC TCGCAGTCGA TGGACTCGGT GTTTCCATGG CTTTGCTTCA GTTTCCTCCT GGCACCGTGA ACCCGCCCCA TACTCACCCT CGTGGAACGG AACTTTTGTT CATTATCGAA GGCACTCTGG ACGTGGGTTT GGTCGATACC ACGAACAAAC TTTTCACCAA CACTCTCTAC AAGGGCGACA TCTTCGCTTT TCCCAAAGGC CTCGTTCATT TCCAGATCAA CAACGACAAG TACAAGACCG TGACGGCACT TGGCGGATTC AGCAGCTCCA ACGCAGGGCT GGTCCGTCTG CCGAATACTC TGTTCAATAC ATCCACGCCA ATCTCTGATA AGGTGCTCCA GATTTCTTTT GGCATATCTG GTGATGTAGT CAAGGCATTG AGAGCTCAAT TCGCTTGA |
Protein |
>Mp3g09690.1 MGRLLHSSFA LLVFIAVALT LQSVQASDPE LTKDFQVPAG INAADIDGTF FTSEALRNVM PNVASPFATV TTANLVAPAK APFLAVDGLG VSMALLQFPP GTVNPPHTHP RGTELLFIIE GTLDVGLVDT TNKLFTNTLY KGDIFAFPKG LVHFQINNDK YKTVTALGGF SSSNAGLVRL PNTLFNTSTP ISDKVLQISF GISGDVVKAL RAQFA |