Mp3g14360



Description

Annotation

Database ID Description
Pfam PF13426 PAS domain
Pfam PF07646 Kelch motif
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF81383 F-box domain
SUPERFAMILY SSF117281 Kelch motif
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain)
CDD cd00130 PAS
FunFam G3DSA:2.120.10.80:FF:000005 Putative LOV domain-containing protein
FunFam G3DSA:3.30.450.20:FF:000041 Adagio protein 1
Gene3D G3DSA:1.20.1280.50 -
Pfam PF13418 Galactose oxidase, central domain
NCBIfam TIGR00229 PAS domain S-box protein
Gene3D G3DSA:3.30.450.20 PAS domain
PANTHER PTHR46175 BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR
Gene3D G3DSA:2.120.10.80 -
ProSiteProfiles PS50112 PAS repeat profile.
Pfam PF12937 F-box-like
KOG KOG0379 Kelch repeat-containing proteins; N-term missing; C-term missing; [R]
KOG KOG0379 Kelch repeat-containing proteins; C-term missing; [R]
KOG KOG1229 3'5'-cyclic nucleotide phosphodiesterases; C-term missing; [T]
KOG KOG2997 F-box protein FBX9; N-term missing; C-term missing; [R]
MapolyID Mapoly0004s0235 -
GO GO:0009637 response to blue light
GO GO:0005634 nucleus
GO GO:0005515 protein binding
GO GO:0019005 SCF ubiquitin ligase complex
GO GO:0007623 circadian rhythm
GO GO:0005829 cytosol

Nomenclature

Gene symbol Product Transcript ID Status
MpFKF Orthologue of FKF1/ZTL/LKP2 in Arabidopsis Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g14360.1 chr3:14802254..14807396 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g14360.2 chr3:14802254..14807396 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.