Mp3g15530



Description

Annotation

Database ID Description
Gene3D G3DSA:4.10.860.120 RNA polymerase II, clamp domain
Pfam PF04998 RNA polymerase Rpb1, domain 5
Pfam PF04997 RNA polymerase Rpb1, domain 1
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR19376 DNA-DIRECTED RNA POLYMERASE
Gene3D G3DSA:2.40.40.20 -
Gene3D G3DSA:3.10.450.40 -
Pfam PF11523 Protein of unknown function (DUF3223)
Pfam PF00623 RNA polymerase Rpb1, domain 2
Gene3D G3DSA:1.10.274.100 RNA polymerase Rpb1, domain 3
Gene3D G3DSA:6.10.250.2940 -
Gene3D G3DSA:3.30.1490.180 RNA polymerase ii
SMART SM00663 rpolaneu7
SUPERFAMILY SSF64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
Gene3D G3DSA:1.10.132.30 -
Pfam PF04983 RNA polymerase Rpb1, domain 3
Pfam PF05000 RNA polymerase Rpb1, domain 4
KOG KOG0260 RNA polymerase II, large subunit; [K]
KOG KOG2992 Nucleolar GTPase/ATPase p130; N-term missing; [Y]
MapolyID Mapoly0004s0120 -
GO GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO GO:0006351 DNA-templated transcription
GO GO:0001055 RNA polymerase II activity
GO GO:0005665 RNA polymerase II, core complex
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpNRPE1a Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g15530.1 chr3:16000414..16016961 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.