Mp3g17930



Description

Annotation

Database ID Description
CDD cd11454 bHLH_AtIND_like
Gene3D G3DSA:4.10.280.10 -
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:4.10.280.10:FF:000046 Transcription factor bHLH83
Pfam PF00010 Helix-loop-helix DNA-binding domain
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
PANTHER PTHR45914 TRANSCRIPTION FACTOR HEC3-RELATED
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SMART SM00353 finulus
MapolyID Mapoly0039s0003 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH14 transcription factor, bHLH Published
MpRSL1 ROOTHAIR DEFECTIVE SIX-LIKE1 Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g17930.1 chr3:19107677..19113691 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.