Mp3g19430



Description

Annotation

Database ID Description
Pfam PF00176 SNF2-related domain
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:3.40.220.10 Leucine Aminopeptidase, subunit E, domain 1
SUPERFAMILY SSF52949 Macro domain-like
Gene3D G3DSA:3.40.50.300 -
SMART SM00487 ultradead3
Pfam PF00271 Helicase conserved C-terminal domain
CDD cd18793 SF2_C_SNF
SMART SM00490 helicmild6
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
PANTHER PTHR47157 CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE
FunFam G3DSA:3.40.50.300:FF:001488 Putative helicase CHR10
KEGG K20092 chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
KOG KOG0385 Chromatin remodeling complex WSTF-ISWI, small subunit; [K]
MapolyID Mapoly0049s0091 -
GO GO:0005524 ATP binding
GO GO:0006338 chromatin remodeling
GO GO:0140658 ATP-dependent chromatin remodeler activity
GO GO:0003678 DNA helicase activity
GO GO:0006281 DNA repair

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.13 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g19430.1 chr3:21423012..21430271 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.