Mp3g21660



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF03547 Membrane transport protein
NCBIfam TIGR00946 auxin efflux carrier
PANTHER PTHR31752 AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED
KEGG K13947 auxin efflux carrier family protein
MapolyID Mapoly0089s0050 -
GO GO:0055085 transmembrane transport
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpPIN1 Encodes auxin efflux carrier Published

Associated Literature (AI-based literature mining, Beta-version)

Auxin-efflux transporter analyzed as a major MpANT target. RT-qPCR and PIN1 immunolocalization showed MpANT modulates MpPIN1 expression/localization and auxin distribution; an APB-binding site is present in the MpPIN1 promoter.

2 core 4 peripheral

Melissa DÁ, Luis LJ, Eduardo FS, Annie EC, Domingo MÁ, Tom FJ, Jesús LR, Fernando OM, John BL, Mario AA, Cruz-Ramírez A. (2025) · Physiologia plantarum  research experimental subject
Auxin-efflux transporter analyzed as a major MpANT target. RT-qPCR and PIN1 immunolocalization showed MpANT modulates MpPIN1 expression/localization and auxin distribution; an APB-binding site is present in the MpPIN1 promoter.
Fisher, T. J., et al. (2023) · New Phytologist  research experimental subject
PIN-FORMED auxin efflux carrier (Mp3g21660; the only canonical PM-localized PIN, aka MpPINZ); required for shoot phototropism/gravitropism and facilitates meristem formation. Mppin1 loss-of-function alleles analyzed.
Kurtovic, K., et al. (2025) · New Phytologist  research experimental tool
M. polymorpha (MpPIN1, Mapoly0089s0050) used as a heterologous test system: CbPINa:GFP expressed in M. polymorpha and tested for complementation of Mppin1 mutant sporelings; MpPIN1 also included in PIN sequence alignments as the single canonical long-loop PIN.
Marron, A. O., et al. (2023) · The Plant Journal  research experimental tool
Used as a marker line to visualize polar auxin transport; elevated auxin treatment increased the spatial distribution of MpPIN1 expression as predicted.
Lagercrantz, U., et al. (2022) · PLoS ONE  research experimental tool
Auxin-transport marker assayed by qRT-PCR; shows increased expression in Mpluxge mutants, consistent with elevated auxin signaling.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g21660.1 chr3:24176992..24182520 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g21660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g21660 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.