Mp3g23400



Description

Annotation

Database ID Description
PRINTS PR00315 GTP-binding elongation factor signature
ProSiteProfiles PS51722 Translational (tr)-type guanine nucleotide-binding (G) domain profile.
Pfam PF00009 Elongation factor Tu GTP binding domain
Hamap MF_00118_A Elongation factor Tu [tuf].
FunFam G3DSA:3.40.50.300:FF:000255 Elongation factor 1-alpha
PANTHER PTHR23115 TRANSLATION FACTOR
CDD cd01883 EF1_alpha
ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature.
FunFam G3DSA:2.40.30.10:FF:000003 Elongation factor 1-alpha
Pfam PF03143 Elongation factor Tu C-terminal domain
NCBIfam TIGR00483 translation elongation factor EF-1 subunit alpha
CDD cd03705 EF1_alpha_III
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Gene3D G3DSA:2.40.30.10 Translation factors
CDD cd03693 EF1_alpha_II
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
FunFam G3DSA:2.40.30.10:FF:000005 Elongation factor 1-alpha
SUPERFAMILY SSF50447 Translation proteins
Pfam PF03144 Elongation factor Tu domain 2
KEGG K03231 elongation factor 1-alpha
KOG KOG0052 Translation elongation factor EF-1 alpha/Tu; [J]
MapolyID Mapoly0024s0116 -
GO GO:0003924 GTPase activity
GO GO:0003746 translation elongation factor activity
GO GO:0006412 translation
GO GO:0005525 GTP binding
GO GO:0006414 translational elongation

Nomenclature

Gene symbol Product Transcript ID Status
MpEF1 Housekeeping Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g23400.1 chr3:26594189..26596642 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g23400.2 chr3:26594189..26596363 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.