Mp3g23440



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.160.60 Classic Zinc Finger
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
ProSiteProfiles PS50157 Zinc finger C2H2 type domain profile.
PANTHER PTHR46353 ZINC FINGER PROTEIN 5
Pfam PF13912 C2H2-type zinc finger
SUPERFAMILY SSF57667 beta-beta-alpha zinc fingers
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
MapolyID Mapoly0024s0120 -
GO GO:0005634 nucleus
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0010090 trichome morphogenesis
GO GO:0009736 cytokinin-activated signaling pathway
GO GO:0010026 trichome differentiation
GO GO:0000976 transcription cis-regulatory region binding
GO GO:0009740 gibberellic acid mediated signaling pathway

Nomenclature

Gene symbol Product Transcript ID Status
MpJAGGED transcription factor, C2H2-ZnF Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g23440.1 chr3:26639388..26643717 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.