Mp4g01470



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR12131 ATP-DEPENDENT RNA AND DNA HELICASE
SMART SM00490 helicmild6
Pfam PF08148 DSHCT (NUC185) domain
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Coils Coil Coil
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SMART SM00487 ultradead3
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:1.10.3380.30 -
Gene3D G3DSA:3.40.50.300 -
SMART SM01142 DSHCT_2
Pfam PF00270 DEAD/DEAH box helicase
CDD cd18795 SF2_C_Ski2
KEGG K26077 ATP-dependent RNA helicase ISE2 [EC:3.6.4.13]
KOG KOG0947 Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [A]
MapolyID Mapoly0098s0053 -
GO GO:0006401 RNA catabolic process
GO GO:0005524 ATP binding
GO GO:0003724 RNA helicase activity
GO GO:0070478 nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
GO GO:0055087 Ski complex
GO GO:0003676 nucleic acid binding

Nomenclature

Gene symbol Product Transcript ID Status
MpISE2 Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01470.1 chr4:1759009..1764371 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.