Mp4g01780



Description

Annotation

Database ID Description
ProSiteProfiles PS50941 Chitin-binding type-1 domain profile.
Gene3D G3DSA:3.30.20.10 Endochitinase, domain 2
SUPERFAMILY SSF53955 Lysozyme-like
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
Pfam PF00182 Chitinase class I
PANTHER PTHR22595 CHITINASE-RELATED
Pfam PF00187 Chitin recognition protein
Gene3D G3DSA:3.30.60.10 -
SMART SM00270 ChitinBD_3
FunFam G3DSA:3.30.20.10:FF:000001 Endochitinase (Chitinase)
CDD cd00325 chitinase_GH19
SUPERFAMILY SSF57016 Plant lectins/antimicrobial peptides
ProSitePatterns PS00026 Chitin recognition or binding domain signature.
Gene3D G3DSA:1.10.530.10 -
PIRSF PIRSF001060 Endochitinase
CDD cd00035 ChtBD1
KEGG K20547 basic endochitinase B [EC:3.2.1.14]
KOG KOG4742 Predicted chitinase; [R]
MapolyID Mapoly0098s0022 -
GO GO:0006032 chitin catabolic process
GO GO:0016998 cell wall macromolecule catabolic process
GO GO:0008061 chitin binding
GO GO:0004568 chitinase activity
GO GO:0005975 carbohydrate metabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpGH19.4 Cell wall related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01780.1 chr4:2227508..2229283 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.