Mp4g01880



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00360 rrm1_1
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
Gene3D G3DSA:3.30.70.330 -
SUPERFAMILY SSF54928 RNA-binding domain, RBD
Pfam PF00076 RNA recognition motif
PANTHER PTHR48034 TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
KEGG K12900 serine/arginine-rich splicing factor 10
KOG KOG4207 Predicted splicing factor, SR protein superfamily; C-term missing; [A]
MapolyID Mapoly0098s0012 -
GO GO:0048026 positive regulation of mRNA splicing, via spliceosome
GO GO:0003723 RNA binding
GO GO:0003676 nucleic acid binding
GO GO:0005681 spliceosomal complex

Nomenclature

Gene symbol Product Transcript ID Status
MpSR3 SR proteins, RNA-splicing Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01880.1 chr4:2329853..2335669 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g01880.2 chr4:2329853..2335669 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.