Mp4g02650



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
Pfam PF13771 PHD-like zinc-binding domain
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd15571 ePHD
Pfam PF05033 Pre-SET motif
ProSiteProfiles PS51805 Extended PHD (ePHD) domain profile.
SMART SM00317 set_7
ProSiteProfiles PS50868 Post-SET domain profile.
ProSiteProfiles PS50280 SET domain profile.
PANTHER PTHR46223 HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H
CDD cd10538 SET_SETDB-like
Gene3D G3DSA:2.170.270.10 SET domain
SUPERFAMILY SSF82199 SET domain
Pfam PF00856 SET domain
KOG KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [BK]
KOG KOG1084 Transcription factor TCF20; N-term missing; [K]
KOG KOG1847 mRNA splicing factor; N-term missing; [A]
MapolyID Mapoly0080s0034 -
GO GO:0005634 nucleus
GO GO:0005515 protein binding
GO GO:0008270 zinc ion binding
GO GO:0042054 histone methyltransferase activity
GO GO:0034968 obsolete histone lysine methylation

Nomenclature

Gene symbol Product Transcript ID Status
MpSUVR3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g02650.1 chr4:3233171..3247619 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g02650.2 chr4:3233171..3248599 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.