| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.160.20.10 | - |
| Pfam | PF00295 | Glycosyl hydrolases family 28 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| MapolyID | Mapoly0087s0047 | - |
| GO | GO:0004650 | polygalacturonase activity |
| GO | GO:0005975 | carbohydrate metabolic process |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGH28.5 | Cell wall related protein | Provisional |
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g05430.1 AATAATTTAA CTGATGAAAG TTGTTGTACT ATCTCGCGCA ATATGAAGCT CTCACACGCA CGCCTCGCTA TCCTGTTCCT CGCTTTCCTG TTCCTATCGA TAGCTTTGAT AATGTTCACT GTTGTTGTAA GTCGGTATCC GAATTTCAAC AGTGGAATTG CTCCACGTAC CGGGTCCAGG AAAGTTTTTG AACCATGTTC CTTCCCACGT AAAGTTCTCT GTGAGAAGAA ACCGGTGAAA ATTCCTACAC CTTCTACGGT AAGAATCTAA TCGGGTCTGA CGAGAATTTA CTTTTCAGTT CGGTTGAAAT TTCTCCTTTC TTCTTCGCTA AATTTGATCT ATGTTTTTTA CAGTATCACA CTCACACAGT TTCCGGATCA CCAACTCCGG AACCAGCTTG CACAAGGAAG CTCCTGTGCA AAACCACGGG CAGAACACCG TCTCCAGAAC AAACTCTGCC GAATTTGGGA AGAAAGATAC TCAGTCTTCG TCCTAGAGGC GACGGTCAGA TGATGGAGAT AATCCCTTTC CTCCGTCGTC AGTTCCGCAA GTATATGGTG AGTCTTGTGG CTCAACAGGA TCCTCCGACT CTGGAGGACC TCTCTCGCCG TGGAAGATTT CAGTTTATAC CCGGGACCCT GCAGATCATG GGTATGCTGT ACCGACTCTT CCGCCGGTGG GAAGCTAACT CGGAGGCGAC TAGCGACGAG AAGGGGAGAA GACACGTCAT GTATCGACTG ATGGTAACTG CCTGTAGCAA GTCGCATCTG AGACTCTCGT CTGTGTTGGT TCGTACCCGG TCAGTCGGTC TCTTGTACAG TCCTGATCCT TTTCTTTGCT TGTGATATCG CAGTCAGATA TGGCTTCCTT CGTTGCAGAA CAAGTCAAAG GTGTTGTTGA ATACTTTTCA GACTTCCGAG TCGATCCTCC GGAGGAACTT TCTCTGACCG TGCGACCAAA TCTTGTCCAT GAACTCTTGC AAGCGTACGT TCCATCAGCA ATAGCATTTT TTTATGTGTA TTTACTTCAC TGAACTTTAT TCAACATTTA TCTATATTTC GTTTCTCAAT CAAACTTGTG CGACGCAGAT CTCGGGGTAT GATTTTCAGC ACTGATGGAC CTCCCCGTGC TCTTCACTTT TATTATCACA CTGCACTCAG CTGTAAGTCA TTCTGGAACT ACAGTATCCG AGGTTTTAGA AGTGATTTAG ATGCAGTGAT TAAGATGGTC TGCTCTCCTG TGAGCGAGTA TGACATCATA AAGCAACGAT GCCCTTTAGC AATTGTTCTA CATGAACTCC GAGACCCATG ATTTTTTAAT GTTAGTGCAG TGATATCAAC AAACTTGGAG GCAGGTGGTT TTGCGAGTCA ACCTTTCCGG TGCGTATACA TTGGAATATT TTCATCAATG TCGATGGCGG AAATTCCAGG TTCCTTGGGA CCACATCGGA AGAATTTACT CGAATGGATT TCGTCTCCTG AAGGATGTAT CATCCACCCT TCTGGGTTCA TGGTGAGGCA TAATCTAACC ACGTTCTTGT ATTCCTCAAT CCAGTACTTA ACCCATTTCT GGGGAAGGTT GCGATTTGCT AAAAGTAAAA AATGTTTTCA TCCTATTTCC AGAACTCTTA GTAGTAATTA CAATTCAGTG TATCGGAATT GGTGTAACAA GTAGATGAAA TTCAATAGTG TCAAATATAC TGAGTGAACT TATTATTGAA AATATGCAGA TGACTACCTA TGCGTGGTGG CTTGGTGAAT GCACACATGG TGTTGGTGGT GGTGGTGTGA CAGTCGTTCG CACTGCAGTA CAAATCACCC AGACCACCAA CGTTGTAGTG AAGGAGGTGA CCATCCAAAA TGCTTCGCAA GAACTTTTGA TTTTTGAGAC CTGTTTAATA GTGCTCGTGA AAGAATTGAA GGTGACAGCT CCAGAAGATA GCCCCAAGAC AGATGATATA AGCTTGGCCA ATACTCAGAA GGCCACTGTC GAGTATTCCG TTCTGTCGTT CACACTACTC GTGAAGTGTT ACAACTTGGC CTCCGTAGAG TTCGAATCTC CGAGTGCGAC AGCTTGTGGT CATGTGCGAC TGATTCTGGA GACCGTAGGA GCCATTCTCC GATTTCGTCC AGACTTGGAG ATACTAGGGA CCGAGGTGTT CGATCGTATC GAAAACCAGG TTCATGTCCG AATTATAGAA GAATCTTGAT GATGCTGAGA TGAGACAAGT TGCCCACCTT GGAGTCTAGG TATGGTGCAC TTTTTGCACT GGTATTTACC GTTTGGGTCA GGGTCTAGTA CTTGAAACCA ACGTGAAAAC TTCCCTATAT TCTTGTGCCT CCTTAGACAA TGTTCTCTGC TTACCAAACC CCAGTCTTTC TTTCTGTTGG ATGATCCTGG CAAAGGATTA TGGACCCATG TACAGGTGCA TCGATGTTTT CATTGTGTGC TCCTGCAGAA GTTGCTGCGG GGATTCAGTC CCGCATAGTT TTGTAAACAT TTGACAATAA TAAAGCTTT |
mRNA UTR + CDS |
| >Mp4g05430.1 AATAATTTAA CTGATGAAAG TTGTTGTACT ATCTCGCGCA ATATGAAGCT CTCACACGCA CGCCTCGCTA TCCTGTTCCT CGCTTTCCTG TTCCTATCGA TAGCTTTGAT AATGTTCACT GTTGTTGTAA GTCGGTATCC GAATTTCAAC AGTGGAATTG CTCCACGTAC CGGGTCCAGG AAAGTTTTTG AACCATGTTC CTTCCCACGT AAAGTTCTCT GTGAGAAGAA ACCGGTGAAA ATTCCTACAC CTTCTACGTA TCACACTCAC ACAGTTTCCG GATCACCAAC TCCGGAACCA GCTTGCACAA GGAAGCTCCT GTGCAAAACC ACGGGCAGAA CACCGTCTCC AGAACAAACT CTGCCGAATT TGGGAAGAAA GATACTCAGT CTTCGTCCTA GAGGCGACGG TCAGATGATG GAGATAATCC CTTTCCTCCG TCGTCAGTTC CGCAAGTATA TGGTGAGTCT TGTGGCTCAA CAGGATCCTC CGACTCTGGA GGACCTCTCT CGCCGTGGAA GATTTCAGTT TATACCCGGG ACCCTGCAGA TCATGGGTAT GCTGTACCGA CTCTTCCGCC GGTGGGAAGC TAACTCGGAG GCGACTAGCG ACGAGAAGGG GAGAAGACAC GTCATGTATC GACTGATGTC AGATATGGCT TCCTTCGTTG CAGAACAAGT CAAAGGTGTT GTTGAATACT TTTCAGACTT CCGAGTCGAT CCTCCGGAGG AACTTTCTCT GACCGTGCGA CCAAATCTTG TCCATGAACT CTTGCAAGCA TCTCGGGGTA TGATTTTCAG CACTGATGGA CCTCCCCGTG CTCTTCACTT TTATTATCAC ACTGCACTCA GCTTGATATC AACAAACTTG GAGGCAGGTG GTTTTGCGAG TCAACCTTTC CGGTGCGTAT ACATTGGAAT ATTTTCATCA ATGTCGATGG CGGAAATTCC AGGTTCCTTG GGACCACATC GGAAGAATTT ACTCGAATGG ATTTCGTCTC CTGAAGGATG TATCATCCAC CCTTCTGGGT TCATGATGAC TACCTATGCG TGGTGGCTTG GTGAATGCAC ACATGGTGTT GGTGGTGGTG GTGTGACAGT CGTTCGCACT GCAGTACAAA TCACCCAGAC CACCAACGTT GTAGTGAAGG AGGTGACCAT CCAAAATGCT TCGCAAGAAC TTTTGATTTT TGAGACCTGT TTAATAGTGC TCGTGAAAGA ATTGAAGGTG ACAGCTCCAG AAGATAGCCC CAAGACAGAT GATATAAGCT TGGCCAATAC TCAGAAGGCC ACTGTCGAGT ATTCCGTTCT GTCGTTCACA CTACTCGTGA AGTGTTACAA CTTGGCCTCC GTAGAGTTCG AATCTCCGAG TGCGACAGCT TGTGGTCATG TGCGACTGAT TCTGGAGACC GTAGGAGCCA TTCTCCGATT TCGTCCAGAC TTGGAGATAC TAGGGACCGA GGTGTTCGAT CGTATCGAAA ACCAGGTTCA TGTCCGAATT ATAGAAGAAT CTTGATGATG CTGAGATGAG ACAAGTTGCC CACCTTGGAG TCTAGGTATG GTGCACTTTT TGCACTGGTA TTTACCGTTT GGGTCAGGGT CTAGTACTTG AAACCAACGT GAAAACTTCC CTATATTCTT GTGCCTCCTT AGACAATGTT CTCTGCTTAC CAAACCCCAG TCTTTCTTTC TGTTGGATGA TCCTGGCAAA GGATTATGGA CCCATGTACA GGTGCATCGA TGTTTTCATT GTGTGCTCCT GCAGAAGTTG CTGCGGGGAT TCAGTCCCGC ATAGTTTTGT AAACATTTGA CAATAATAAA GCTTT |
CDS |
| >Mp4g05430.1 ATGAAGCTCT CACACGCACG CCTCGCTATC CTGTTCCTCG CTTTCCTGTT CCTATCGATA GCTTTGATAA TGTTCACTGT TGTTGTAAGT CGGTATCCGA ATTTCAACAG TGGAATTGCT CCACGTACCG GGTCCAGGAA AGTTTTTGAA CCATGTTCCT TCCCACGTAA AGTTCTCTGT GAGAAGAAAC CGGTGAAAAT TCCTACACCT TCTACGTATC ACACTCACAC AGTTTCCGGA TCACCAACTC CGGAACCAGC TTGCACAAGG AAGCTCCTGT GCAAAACCAC GGGCAGAACA CCGTCTCCAG AACAAACTCT GCCGAATTTG GGAAGAAAGA TACTCAGTCT TCGTCCTAGA GGCGACGGTC AGATGATGGA GATAATCCCT TTCCTCCGTC GTCAGTTCCG CAAGTATATG GTGAGTCTTG TGGCTCAACA GGATCCTCCG ACTCTGGAGG ACCTCTCTCG CCGTGGAAGA TTTCAGTTTA TACCCGGGAC CCTGCAGATC ATGGGTATGC TGTACCGACT CTTCCGCCGG TGGGAAGCTA ACTCGGAGGC GACTAGCGAC GAGAAGGGGA GAAGACACGT CATGTATCGA CTGATGTCAG ATATGGCTTC CTTCGTTGCA GAACAAGTCA AAGGTGTTGT TGAATACTTT TCAGACTTCC GAGTCGATCC TCCGGAGGAA CTTTCTCTGA CCGTGCGACC AAATCTTGTC CATGAACTCT TGCAAGCATC TCGGGGTATG ATTTTCAGCA CTGATGGACC TCCCCGTGCT CTTCACTTTT ATTATCACAC TGCACTCAGC TTGATATCAA CAAACTTGGA GGCAGGTGGT TTTGCGAGTC AACCTTTCCG GTGCGTATAC ATTGGAATAT TTTCATCAAT GTCGATGGCG GAAATTCCAG GTTCCTTGGG ACCACATCGG AAGAATTTAC TCGAATGGAT TTCGTCTCCT GAAGGATGTA TCATCCACCC TTCTGGGTTC ATGATGACTA CCTATGCGTG GTGGCTTGGT GAATGCACAC ATGGTGTTGG TGGTGGTGGT GTGACAGTCG TTCGCACTGC AGTACAAATC ACCCAGACCA CCAACGTTGT AGTGAAGGAG GTGACCATCC AAAATGCTTC GCAAGAACTT TTGATTTTTG AGACCTGTTT AATAGTGCTC GTGAAAGAAT TGAAGGTGAC AGCTCCAGAA GATAGCCCCA AGACAGATGA TATAAGCTTG GCCAATACTC AGAAGGCCAC TGTCGAGTAT TCCGTTCTGT CGTTCACACT ACTCGTGAAG TGTTACAACT TGGCCTCCGT AGAGTTCGAA TCTCCGAGTG CGACAGCTTG TGGTCATGTG CGACTGATTC TGGAGACCGT AGGAGCCATT CTCCGATTTC GTCCAGACTT GGAGATACTA GGGACCGAGG TGTTCGATCG TATCGAAAAC CAGGTTCATG TCCGAATTAT AGAAGAATCT TGA |
Protein |
| >Mp4g05430.1 MKLSHARLAI LFLAFLFLSI ALIMFTVVVS RYPNFNSGIA PRTGSRKVFE PCSFPRKVLC EKKPVKIPTP STYHTHTVSG SPTPEPACTR KLLCKTTGRT PSPEQTLPNL GRKILSLRPR GDGQMMEIIP FLRRQFRKYM VSLVAQQDPP TLEDLSRRGR FQFIPGTLQI MGMLYRLFRR WEANSEATSD EKGRRHVMYR LMSDMASFVA EQVKGVVEYF SDFRVDPPEE LSLTVRPNLV HELLQASRGM IFSTDGPPRA LHFYYHTALS LISTNLEAGG FASQPFRCVY IGIFSSMSMA EIPGSLGPHR KNLLEWISSP EGCIIHPSGF MMTTYAWWLG ECTHGVGGGG VTVVRTAVQI TQTTNVVVKE VTIQNASQEL LIFETCLIVL VKELKVTAPE DSPKTDDISL ANTQKATVEY SVLSFTLLVK CYNLASVEFE SPSATACGHV RLILETVGAI LRFRPDLEIL GTEVFDRIEN QVHVRIIEES |