Mp4g08690



Description

Annotation

Database ID Description
SUPERFAMILY SSF90229 CCCH zinc finger
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF55277 GYF domain
ProSiteProfiles PS51360 Plus3 domain profile.
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Coils Coil Coil
Pfam PF03126 Plus-3 domain
CDD cd15568 PHD5_NSD
SUPERFAMILY SSF159042 Plus3-like
Gene3D G3DSA:1.10.245.10 SWIB/MDM2 domain
ProSiteProfiles PS51925 SWIB/MDM2 domain profile.
SMART SM00719 rtf1
Gene3D G3DSA:3.30.1490.40 -
SUPERFAMILY SSF47592 SWIB/MDM2 domain
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SMART SM00249 PHD_3
FunFam G3DSA:3.30.40.10:FF:000303 Zinc finger CCCH domain-containing protein 19
ProSiteProfiles PS50829 GYF domain profile.
PANTHER PTHR46695 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED
SMART SM00151 swib_2
SMART SM00444 gyf_5
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
CDD cd00072 GYF
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
Gene3D G3DSA:3.90.70.200 -
Pfam PF02201 SWIB/MDM2 domain
ProSitePatterns PS01359 Zinc finger PHD-type signature.
CDD cd10567 SWIB-MDM2_like
Pfam PF02213 GYF domain
KOG KOG1946 RNA polymerase I transcription factor UAF; [K]
KOG KOG1862 GYF domain containing proteins; N-term missing; C-term missing; [R]
KOG KOG1081 Transcription factor NSD1 and related SET domain proteins; C-term missing; [K]
KOG KOG2402 Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein); N-term missing; C-term missing; [K]
KOG KOG2416 Acinus (induces apoptotic chromatin condensation); C-term missing; [B]
MapolyID Mapoly0157s0010 -
GO GO:0005515 protein binding
GO GO:0046872 metal ion binding
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H16 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g08690.1 chr4:11076516..11088166 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.