Mp4g09650



Description

Annotation

Database ID Description
CDD cd00086 homeodomain
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF05920 Homeobox KN domain
SMART SM00389 HOX_1
ProSitePatterns PS00027 'Homeobox' domain signature.
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS50071 'Homeobox' domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
PANTHER PTHR11850 HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
KOG KOG0774 Transcription factor PBX and related HOX domain proteins; N-term missing; C-term missing; [K]
MapolyID Mapoly0132s0008 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpBELL2 transcription factor, HD, homeodomain protein Published
MpHD17 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g09650.1 chr4:12538518..12540311 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.