| Database | ID | Description |
|---|---|---|
| ProSitePatterns | PS00716 | Sigma-70 factors family signature 2. |
| FunFam | G3DSA:1.10.601.10:FF:000001 | RNA polymerase sigma factor SigA |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SUPERFAMILY | SSF88659 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| ProSitePatterns | PS00715 | Sigma-70 factors family signature 1. |
| Pfam | PF04545 | Sigma-70, region 4 |
| Pfam | PF04539 | Sigma-70 region 3 |
| Pfam | PF00140 | Sigma-70 factor, region 1.2 |
| Gene3D | G3DSA:1.10.10.10 | - |
| CDD | cd06171 | Sigma70_r4 |
| NCBIfam | TIGR02997 | RNA polymerase sigma factor, RpoD/SigA family |
| PIRSF | PIRSF000767 | Sigma_factor_SigC |
| PRINTS | PR00046 | Major sigma-70 factor signature |
| NCBIfam | TIGR02937 | sigma-70 family RNA polymerase sigma factor |
| SUPERFAMILY | SSF88946 | Sigma2 domain of RNA polymerase sigma factors |
| Gene3D | G3DSA:1.10.601.10 | RNA Polymerase Primary Sigma Factor |
| Pfam | PF04542 | Sigma-70 region 2 |
| PANTHER | PTHR30603 | RNA POLYMERASE SIGMA FACTOR RPO |
| MapolyID | Mapoly0214s0004 | - |
| GO | GO:0006352 | DNA-templated transcription initiation |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0016987 | sigma factor activity |
| GO | GO:0003677 | DNA binding |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSIG2 | Ortholog of Arabidopsis SIG2 gene | Published |
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g13380.1 GGAGCGCCGG GGCGAGGGAT GCAAGCGCTG CAGAGAGCGA CGAGGGTGGC CCTTTCGGAC GCGCAGAGCA GCCCCCACGG ACAAGAGCAC TGCAGCGGCA CAGACAGAAA TCCGCCGTGC ATTTGAAGGT GCTGGGGGTT AGGGAAGAAG GCCGATTGCG CGCGTTTGAG GTTTGAGGTT TGAGGTTTCG GGCAATCGGT GGTGGCAGAG GAATGACGGA CAAGAGCGAG GAATTTCGCT GCAGCTGGAG GTGAAAGGAG ATGATCAAGC GGAGAGCTGG AGGAGGAGGA GGAGGTGATA GATGATGTCG CAGGACGAAG CGGGAATTTT CTGCGTTTGA CTTCGCCTGC GTGTCCGTGG GCACAGAGAT GGCGGTTGTT GCTACGAGCG AGCTGCTGCG CTTGCACGAC TCGATCACCT GCTCGCCGCA TGCTTCGTCC CGTGATGGCT CTTCCGGTAA ATTGCCAATG CTTGTGGCCC CGGAGGTTTA TGGAGACTTT GCGCATTTCC CTCTGTTCTT TGTGTCGACT TTTATGCTTT CTTTGAACCA CATGTCAGAG TTTGCGGGCG GTGTATTTGA GCTAGTTGGA ATGCAGTTGC CTTCGTTCGA GCTGAGCAGA AAGGGTGCCA CAAGCCATGT TGTCAAAATC CAGTGAATGT TCTGAATGAA ACAGGGGGCC CAAACTGAAT CCTGTTTCTG CTTCTGTGAC GAAGATAATG GTCACCTAAG AAATGGGCTC AGTCACCGAA AGCAATTTAG GAGATGCTCA GATCAAAATT CCTACATGAG AAGTGGTGTA ACATTCCGAT TACGTTGCCT ACCGTAGACC ACGCTTTTTA GGAGTTCACC TGGACGCTGT CGCTGAACTT TGACAGTGGG GGGCATGTGC TGTTATTTGG AACAATTGTC CCAAGCGGCT ACTCTTCTCA GTTGCTAAGG GGGCAGTGAG ACGAAAATCT GAGCTGAATG GAGATAGCCT ATGTTGTGAA TCCTCACTGT TTTAGGAGTG GGATAGTTAC TCTTAAAAAG CTACCTTTGG CATTGCAATG AGTTACACAC TCTGGGAGTC CTTCCTAGCT TTCATAGGAA ATGAGGGTTC TTATTGCTGA ATCTGAAGTC GTTGATGGTT CAAACAACAC TATGAGCGAA GATGTGTGAT ACCATTTCCC CTAGCTTTTC ACTCATCTGT GGTGTGGAAT CCTGAATTGG AGATTTTGGT TTTAAATTTG GAGCCTGAGT TTTTTGATGT GTTACTGACT CCATTTGTAA TAATCTTTTC CAGGTGTTGT GAAGAGCTTG AGGCGAAGTT CTGGGACCAG CAGGAAGCGA GTTACTCTCA AGCAACAGAG AGCTTTTGGA CCTAATTCTT CTCGGTTTAG CGTAGAAACT ACTTGTGCAC CTTCGAGCAT TTCTTACAGC CCCTGTCGAA GGCCATCCAG GTTGGCTCAT TGTTTGTGTT TGGAAATCGA TCTCGATTCG CGTCAGTCTT TACATTTCCA TATCTAAATA CGATTCTTCT TCAGAGTGGG TTTTACTGAC TCCTGCTGGC TCTCTCTTTT TAGGTTGTCG GCCTTTGATC GAATTCAAAA TTTGCCTGTC ACTGCTGCAT CTGCCGGGGA GAAAAGGACA TTTTTACGAC AGTCCATTCA AGCCAATGCT ACCATTGTGA CCACCGAGAG CTGGGTAGGG AGCGATGAAG CAGTGGCTAC TGCCGCAGCC GAGGAAGCCA TGGCTCTCGC AAGAGCTGCT GCAAAGGCCG CCAGGGATGC AGCTGCTTAC GCCGAAGCCC AGGCTTTAGC AGAATCCTTC GATGATTTTC CCACAGAGCA GGATTTGCTG CTTTTGGAGA GGGCTAGGCT TAATGAAATG GCCAAAGGTG GCTCGGTACT AACGATGGAG TCTGCCGATC TTCTAGATGT GGGTGCCGAC ACCGAACAAA TCACTAGTCT TTGGAAAGAA TTAAACTTTG CACCCAGCGA ATTAGATTTA GGGTCAAATT CAGGCTTTAC ATCAGAAGAG GCCCAAGCCG GAAGGCTTTG TGACGATCCA CAGTCCTCCG AATATGAAAG AGACGGTAGG AGCTACAACA TAGCTGTCAG GTCAAACCGT CGGCGAGAGA GGCTATTAAA GAGAGAGCGG GCTCTAGTGA AGGCTGACAA AGCTGCAACT GCCCCTCCCA CTACATCAAA AGCAAAGAAG TCACAGCCTG CATACGATCC TCAAGACCCT GTCCGGGCCT ATCTGAGGGA CATTGGCAAA ACAAAGCTTC TCACCTCCTC CGAAGAGATC GAGCTCGCCG AGGGAATACA GGTAACAATT TGCTCCTCTA CTGGCCTTAG CTCTCGCACT GCCTGGGTAT TTAAGATGAT CCCTTCAGGT GTGCTCGATT CTGTGGTATA CAGGAAGCTA CGACTATTAC ACTTGCGCTG TTTACTGTCG TCATGCCTGA GTTTAAACTT TGTGAATCAA CCTACTTTCT TGCAACTCTT TGATTTCTGG TACTTATGTC TGTTCCAATA TTTCCTGGTT GTTTCTTACC ACAGGATTTG TTAAGGGTAG AGAGTGTGAA GAATGATTTA CGAGAGCAAA TGGGACGAGA GCCAACTCTG ATGGAGTGGG CCAAGGCTGT CGGAACCGAG CGGCACTCAC TTGAGTCACG AATTAAATCA GGACAAGCAT GCAAGGACAG GATGGTGAAT TCCAACTTAC GTCTGGTGGT TTCGATTGCG AAGAGATACC AGGGCAGGGG GATGACCATC CAGGATCTCA TCCAGGTTTG TTTCATCTCC CTTTCCGAAG TCTCTTACCT TGAGGCGGCT GGTTAGCGCC TGTCTTCATC ATTATGATAA GGGTTTTGTG GAAGGGTTTA TATGCGGATT AAAGACAAAT GGCTCTTGAG TCCCAGGATT TTATGTATAC AAAGTAGTCC AGCATCGTCT CCACATAGAT CAGTCCCTTA CACATCTTTA GACCCAGGGA CTTGGGTCTC GCTGTCAAAC CCTAAGGGAA TGTACTCGTA TTTTCAGGAG GGAAGCATGG GTCTGATTCG AGGTGCAGAA AAGTTCGATC ACACCAGAGG GTTTAAGTTC TCAACTTACG CTCACTGGTG GATTCGACAA GCCATCACGA GAGCTATCGC TGATCAGTCG AGAACCATTC GCCTTCCTGT AAGAATTCCA GGTTTTCTTC GCTTTTGTGA ACAAGTATGT GTCCGTGTAT GTTATCCAGT CTGATGTAGG ATATTTCCCT TTCATTCAAT TGTTTTTTTA ATCGACATAA ACCTTCTAAT GTCACTAACC CCATGCCTTC TCGCAGGTAC ATGTCTACGA GTTGTTGTCT CGAATTACCA AAGCAAAGAG CATGTTAGCC GCAGAACACG GACGGGCGCC TAGGGATGAA GAAGTTGCCG AGTTGGTCGG CCTGAGTATT GAGAAGTTGA AAATGGTGAT TAAATCAGCG AGGTCACCGA AATCTATGGA ATTTCCAGTT GGAAAGAACA ATGATACCAC TCTTGGGGTA CTGTGATCAG ACCTATACCC ATGTTCTTTC GTTAGCTATC ACTCCGAAAG CTCCTGCATT GGCCCGTTTC AACCACAGTC CAGATAGATG CCACTCTGAA TGTGCAATTT GGCAAACTGA TTTGGCAAAG TTCTTGAGCT GGTTCTTTAC TTCTCTGAGG TGTAAGTTAT CAATCATGGG AACTATCAAA TGCGAAGTCG ATGGACTGAC CTGAGTATCT TCTATTTGCA GGAAGTTATA CCAGATAAAG ACATTGACTC TCCGGAGGAG GCTATCTCTA AGAGGCTGCT TAAGCAGGAC TTAGATGTCG TTTTGCACAC ACTAAGTCCA CGTGAAAGGG ATGTACTGAG ACTGCGATAT GGTTTGGATG ATGGTAGGAT GAGGACTCTT GAAGAAATAG GAAATGTTTT TAAAGTAACC AGGGAACGTA TTCGACAAAT TGAAGCCAAA GCTTTGAGGA AGCTTCGGCA GCCTAGTAGG AACACTGCAT TGCGCGAGTA TCTCGATCTA TAGCCTAATT CGTCATATTC ATTCCTGCGA GATTCTCCCT TGTGTTTCGG ATGGAGAGCT GAGTCGGTAC CATGATACAA GGCAGAATTT CGCAGTTCAC ATTTAAACGG TCTACCAATT TCTGTGTACA AAGAGTTTGT GCTACTATAG GAGCTGTAAT CACTCCACTT CCATGGAGCT TTGTTGAACC CAGAGCTCAG TAAAGGATCA GTTATTTTGT GTTC |
mRNA UTR + CDS |
| >Mp4g13380.1 GGAGCGCCGG GGCGAGGGAT GCAAGCGCTG CAGAGAGCGA CGAGGGTGGC CCTTTCGGAC GCGCAGAGCA GCCCCCACGG ACAAGAGCAC TGCAGCGGCA CAGACAGAAA TCCGCCGTGC ATTTGAAGGT GCTGGGGGTT AGGGAAGAAG GCCGATTGCG CGCGTTTGAG GTTTGAGGTT TGAGGTTTCG GGCAATCGGT GGTGGCAGAG GAATGACGGA CAAGAGCGAG GAATTTCGCT GCAGCTGGAG GTGAAAGGAG ATGATCAAGC GGAGAGCTGG AGGAGGAGGA GGAGGTGATA GATGATGTCG CAGGACGAAG CGGGAATTTT CTGCGTTTGA CTTCGCCTGC GTGTCCGTGG GCACAGAGAT GGCGGTTGTT GCTACGAGCG AGCTGCTGCG CTTGCACGAC TCGATCACCT GCTCGCCGCA TGCTTCGTCC CGTGATGGCT CTTCCGGTGT TGTGAAGAGC TTGAGGCGAA GTTCTGGGAC CAGCAGGAAG CGAGTTACTC TCAAGCAACA GAGAGCTTTT GGACCTAATT CTTCTCGGTT TAGCGTAGAA ACTACTTGTG CACCTTCGAG CATTTCTTAC AGCCCCTGTC GAAGGCCATC CAGGTTGTCG GCCTTTGATC GAATTCAAAA TTTGCCTGTC ACTGCTGCAT CTGCCGGGGA GAAAAGGACA TTTTTACGAC AGTCCATTCA AGCCAATGCT ACCATTGTGA CCACCGAGAG CTGGGTAGGG AGCGATGAAG CAGTGGCTAC TGCCGCAGCC GAGGAAGCCA TGGCTCTCGC AAGAGCTGCT GCAAAGGCCG CCAGGGATGC AGCTGCTTAC GCCGAAGCCC AGGCTTTAGC AGAATCCTTC GATGATTTTC CCACAGAGCA GGATTTGCTG CTTTTGGAGA GGGCTAGGCT TAATGAAATG GCCAAAGGTG GCTCGGTACT AACGATGGAG TCTGCCGATC TTCTAGATGT GGGTGCCGAC ACCGAACAAA TCACTAGTCT TTGGAAAGAA TTAAACTTTG CACCCAGCGA ATTAGATTTA GGGTCAAATT CAGGCTTTAC ATCAGAAGAG GCCCAAGCCG GAAGGCTTTG TGACGATCCA CAGTCCTCCG AATATGAAAG AGACGGTAGG AGCTACAACA TAGCTGTCAG GTCAAACCGT CGGCGAGAGA GGCTATTAAA GAGAGAGCGG GCTCTAGTGA AGGCTGACAA AGCTGCAACT GCCCCTCCCA CTACATCAAA AGCAAAGAAG TCACAGCCTG CATACGATCC TCAAGACCCT GTCCGGGCCT ATCTGAGGGA CATTGGCAAA ACAAAGCTTC TCACCTCCTC CGAAGAGATC GAGCTCGCCG AGGGAATACA GGATTTGTTA AGGGTAGAGA GTGTGAAGAA TGATTTACGA GAGCAAATGG GACGAGAGCC AACTCTGATG GAGTGGGCCA AGGCTGTCGG AACCGAGCGG CACTCACTTG AGTCACGAAT TAAATCAGGA CAAGCATGCA AGGACAGGAT GGTGAATTCC AACTTACGTC TGGTGGTTTC GATTGCGAAG AGATACCAGG GCAGGGGGAT GACCATCCAG GATCTCATCC AGGAGGGAAG CATGGGTCTG ATTCGAGGTG CAGAAAAGTT CGATCACACC AGAGGGTTTA AGTTCTCAAC TTACGCTCAC TGGTGGATTC GACAAGCCAT CACGAGAGCT ATCGCTGATC AGTCGAGAAC CATTCGCCTT CCTGTACATG TCTACGAGTT GTTGTCTCGA ATTACCAAAG CAAAGAGCAT GTTAGCCGCA GAACACGGAC GGGCGCCTAG GGATGAAGAA GTTGCCGAGT TGGTCGGCCT GAGTATTGAG AAGTTGAAAA TGGTGATTAA ATCAGCGAGG TCACCGAAAT CTATGGAATT TCCAGTTGGA AAGAACAATG ATACCACTCT TGGGGAAGTT ATACCAGATA AAGACATTGA CTCTCCGGAG GAGGCTATCT CTAAGAGGCT GCTTAAGCAG GACTTAGATG TCGTTTTGCA CACACTAAGT CCACGTGAAA GGGATGTACT GAGACTGCGA TATGGTTTGG ATGATGGTAG GATGAGGACT CTTGAAGAAA TAGGAAATGT TTTTAAAGTA ACCAGGGAAC GTATTCGACA AATTGAAGCC AAAGCTTTGA GGAAGCTTCG GCAGCCTAGT AGGAACACTG CATTGCGCGA GTATCTCGAT CTATAGCCTA ATTCGTCATA TTCATTCCTG CGAGATTCTC CCTTGTGTTT CGGATGGAGA GCTGAGTCGG TACCATGATA CAAGGCAGAA TTTCGCAGTT CACATTTAAA CGGTCTACCA ATTTCTGTGT ACAAAGAGTT TGTGCTACTA TAGGAGCTGT AATCACTCCA CTTCCATGGA GCTTTGTTGA ACCCAGAGCT CAGTAAAGGA TCAGTTATTT TGTGTTC |
CDS |
| >Mp4g13380.1 ATGGCGGTTG TTGCTACGAG CGAGCTGCTG CGCTTGCACG ACTCGATCAC CTGCTCGCCG CATGCTTCGT CCCGTGATGG CTCTTCCGGT GTTGTGAAGA GCTTGAGGCG AAGTTCTGGG ACCAGCAGGA AGCGAGTTAC TCTCAAGCAA CAGAGAGCTT TTGGACCTAA TTCTTCTCGG TTTAGCGTAG AAACTACTTG TGCACCTTCG AGCATTTCTT ACAGCCCCTG TCGAAGGCCA TCCAGGTTGT CGGCCTTTGA TCGAATTCAA AATTTGCCTG TCACTGCTGC ATCTGCCGGG GAGAAAAGGA CATTTTTACG ACAGTCCATT CAAGCCAATG CTACCATTGT GACCACCGAG AGCTGGGTAG GGAGCGATGA AGCAGTGGCT ACTGCCGCAG CCGAGGAAGC CATGGCTCTC GCAAGAGCTG CTGCAAAGGC CGCCAGGGAT GCAGCTGCTT ACGCCGAAGC CCAGGCTTTA GCAGAATCCT TCGATGATTT TCCCACAGAG CAGGATTTGC TGCTTTTGGA GAGGGCTAGG CTTAATGAAA TGGCCAAAGG TGGCTCGGTA CTAACGATGG AGTCTGCCGA TCTTCTAGAT GTGGGTGCCG ACACCGAACA AATCACTAGT CTTTGGAAAG AATTAAACTT TGCACCCAGC GAATTAGATT TAGGGTCAAA TTCAGGCTTT ACATCAGAAG AGGCCCAAGC CGGAAGGCTT TGTGACGATC CACAGTCCTC CGAATATGAA AGAGACGGTA GGAGCTACAA CATAGCTGTC AGGTCAAACC GTCGGCGAGA GAGGCTATTA AAGAGAGAGC GGGCTCTAGT GAAGGCTGAC AAAGCTGCAA CTGCCCCTCC CACTACATCA AAAGCAAAGA AGTCACAGCC TGCATACGAT CCTCAAGACC CTGTCCGGGC CTATCTGAGG GACATTGGCA AAACAAAGCT TCTCACCTCC TCCGAAGAGA TCGAGCTCGC CGAGGGAATA CAGGATTTGT TAAGGGTAGA GAGTGTGAAG AATGATTTAC GAGAGCAAAT GGGACGAGAG CCAACTCTGA TGGAGTGGGC CAAGGCTGTC GGAACCGAGC GGCACTCACT TGAGTCACGA ATTAAATCAG GACAAGCATG CAAGGACAGG ATGGTGAATT CCAACTTACG TCTGGTGGTT TCGATTGCGA AGAGATACCA GGGCAGGGGG ATGACCATCC AGGATCTCAT CCAGGAGGGA AGCATGGGTC TGATTCGAGG TGCAGAAAAG TTCGATCACA CCAGAGGGTT TAAGTTCTCA ACTTACGCTC ACTGGTGGAT TCGACAAGCC ATCACGAGAG CTATCGCTGA TCAGTCGAGA ACCATTCGCC TTCCTGTACA TGTCTACGAG TTGTTGTCTC GAATTACCAA AGCAAAGAGC ATGTTAGCCG CAGAACACGG ACGGGCGCCT AGGGATGAAG AAGTTGCCGA GTTGGTCGGC CTGAGTATTG AGAAGTTGAA AATGGTGATT AAATCAGCGA GGTCACCGAA ATCTATGGAA TTTCCAGTTG GAAAGAACAA TGATACCACT CTTGGGGAAG TTATACCAGA TAAAGACATT GACTCTCCGG AGGAGGCTAT CTCTAAGAGG CTGCTTAAGC AGGACTTAGA TGTCGTTTTG CACACACTAA GTCCACGTGA AAGGGATGTA CTGAGACTGC GATATGGTTT GGATGATGGT AGGATGAGGA CTCTTGAAGA AATAGGAAAT GTTTTTAAAG TAACCAGGGA ACGTATTCGA CAAATTGAAG CCAAAGCTTT GAGGAAGCTT CGGCAGCCTA GTAGGAACAC TGCATTGCGC GAGTATCTCG ATCTATAG |
Protein |
| >Mp4g13380.1 MAVVATSELL RLHDSITCSP HASSRDGSSG VVKSLRRSSG TSRKRVTLKQ QRAFGPNSSR FSVETTCAPS SISYSPCRRP SRLSAFDRIQ NLPVTAASAG EKRTFLRQSI QANATIVTTE SWVGSDEAVA TAAAEEAMAL ARAAAKAARD AAAYAEAQAL AESFDDFPTE QDLLLLERAR LNEMAKGGSV LTMESADLLD VGADTEQITS LWKELNFAPS ELDLGSNSGF TSEEAQAGRL CDDPQSSEYE RDGRSYNIAV RSNRRRERLL KRERALVKAD KAATAPPTTS KAKKSQPAYD PQDPVRAYLR DIGKTKLLTS SEEIELAEGI QDLLRVESVK NDLREQMGRE PTLMEWAKAV GTERHSLESR IKSGQACKDR MVNSNLRLVV SIAKRYQGRG MTIQDLIQEG SMGLIRGAEK FDHTRGFKFS TYAHWWIRQA ITRAIADQSR TIRLPVHVYE LLSRITKAKS MLAAEHGRAP RDEEVAELVG LSIEKLKMVI KSARSPKSME FPVGKNNDTT LGEVIPDKDI DSPEEAISKR LLKQDLDVVL HTLSPRERDV LRLRYGLDDG RMRTLEEIGN VFKVTRERIR QIEAKALRKL RQPSRNTALR EYLDL |