Mp4g20670



Description

Annotation

Database ID Description
KEGG K08486 syntaxin 1B/2/3
KOG KOG0810 SNARE protein Syntaxin 1 and related proteins; [U]
SUPERFAMILY SSF47661 t-snare proteins
SMART SM00503 SynN_4
Coils Coil Coil
PANTHER PTHR19957:SF80 SYNTAXIN-121
Pfam PF00804 Syntaxin
CDD cd15848 SNARE_syntaxin1-like
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
SMART SM00397 tSNARE_6
CDD cd00179 SynN
Gene3D G3DSA:1.20.58.70 -
PANTHER PTHR19957 SYNTAXIN
Pfam PF05739 SNARE domain
MapolyID Mapoly0101s0013 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP12B Common ortholog of both Arabidopsis SYP11 and SYP12 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g20670.1 chr4:23436175..23438498 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.