Mp5g01600



Description

Annotation

Database ID Description
PANTHER PTHR11850 HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Pfam PF05920 Homeobox KN domain
SMART SM00389 HOX_1
Gene3D G3DSA:1.10.10.60 -
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00086 homeodomain
ProSiteProfiles PS50071 'Homeobox' domain profile.
Coils Coil Coil
KOG KOG0773 Transcription factor MEIS1 and related HOX domain proteins; [K]
MapolyID Mapoly0175s0020 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpHD20 transcription factor, HD, homeodomain protein Published
MpKNOX1 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g01600.1 chr5:2886015..2890921 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.