Mp5g04260



Description

Annotation

Database ID Description
ProSiteProfiles PS51048 SGS domain profile.
SMART SM00028 tpr_5
SUPERFAMILY SSF49764 HSP20-like chaperones
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50005 TPR repeat profile.
SUPERFAMILY SSF48452 TPR-like
Gene3D G3DSA:2.60.40.790 -
CDD cd06466 p23_CS_SGT1_like
PANTHER PTHR45862 PROTEIN SGT1 HOMOLOG
Pfam PF13432 Tetratricopeptide repeat
ProSiteProfiles PS51203 CS domain profile.
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
Pfam PF04969 CS domain
Pfam PF05002 SGS domain
KEGG K12795 suppressor of G2 allele of SKP1
KOG KOG1309 Suppressor of G2 allele of skp1; [T]
KOG KOG0548 Molecular co-chaperone STI1; C-term missing; [O]
MapolyID Mapoly0141s0033 -
GO GO:0005634 nucleus
GO GO:0005737 cytoplasm
GO GO:0051087 protein-folding chaperone binding
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpSGT1 Disease resistance Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g04260.1 chr5:6057919..6063039 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g04260.2 chr5:6057919..6063039 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.