Mp5g04260



Description

Annotation

Database ID Description
ProSiteProfiles PS51048 SGS domain profile.
SMART SM00028 tpr_5
SUPERFAMILY SSF49764 HSP20-like chaperones
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50005 TPR repeat profile.
SUPERFAMILY SSF48452 TPR-like
Gene3D G3DSA:2.60.40.790 -
CDD cd06466 p23_CS_SGT1_like
PANTHER PTHR45862 PROTEIN SGT1 HOMOLOG
Pfam PF13432 Tetratricopeptide repeat
ProSiteProfiles PS51203 CS domain profile.
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
Pfam PF04969 CS domain
Pfam PF05002 SGS domain
KEGG K12795 suppressor of G2 allele of SKP1
KOG KOG1309 Suppressor of G2 allele of skp1; [T]
KOG KOG0548 Molecular co-chaperone STI1; C-term missing; [O]
MapolyID Mapoly0141s0033 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSGT1 Disease resistance Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g04260.1 chr5:6057919..6063039 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g04260.2 chr5:6057919..6063039 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.