Mp5g04800



Description

Annotation

Database ID Description
Pfam PF04825 N terminus of Rad21 / Rec8 like protein
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
PANTHER PTHR12585 SCC1 / RAD21 FAMILY MEMBER
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF04824 Conserved region of Rad21 / Rec8 like protein
Gene3D G3DSA:1.10.10.580 Structural maintenance of chromosome 1. Chain E
FunFam G3DSA:1.10.10.580:FF:000002 Sister chromatid cohesion 1 protein 4
CDD cd21793 Rad21_Rec8_M_AtSYN1-like
Coils Coil Coil
KEGG K06670 cohesin complex subunit SCC1
KOG KOG1213 Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1; C-term missing; [D]
KOG KOG1213 Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1; N-term missing; [D]
KOG KOG0943 Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily; N-term missing; C-term missing; [O]
MapolyID Mapoly0027s0147 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRAD21 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g04800.1 chr5:6892342..6902987 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.