Mp5g06080



Description

Annotation

Database ID Description
PANTHER PTHR12480 ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF51197 Clavaminate synthase-like
Gene3D G3DSA:2.60.120.650 Cupin
Pfam PF12937 F-box-like
SMART SM00558 cupin_9
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
CDD cd09917 F-box_SF
SUPERFAMILY SSF81383 F-box domain
ProSiteProfiles PS51184 JmjC domain profile.
Gene3D G3DSA:1.20.1280.50 -
Pfam PF13621 Cupin-like domain
FunFam G3DSA:2.60.120.650:FF:000045 F-box protein At1g78280
KEGG K11323 histone arginine demethylase JMJD6 [EC:1.14.11.-]
KOG KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain; [BT]
MapolyID Mapoly0027s0020 -
GO GO:0005737 cytoplasm
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHDM5 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06080.1 chr5:8071100..8079332 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.