Mp5g06430



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Coils Coil Coil
FunFam G3DSA:1.20.1060.20:FF:000003 Structural maintenance of chromosomes 4
Gene3D G3DSA:1.10.287.1490 -
FunFam G3DSA:3.40.50.300:FF:000481 Structural maintenance of chromosomes 4
SUPERFAMILY SSF75553 Smc hinge domain
Gene3D G3DSA:3.40.50.300 -
Pfam PF02463 RecF/RecN/SMC N terminal domain
Gene3D G3DSA:1.20.1060.20 -
Pfam PF06470 SMC proteins Flexible Hinge Domain
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00968 SMC_hinge_2
Gene3D G3DSA:3.30.70.1620 -
FunFam G3DSA:3.40.50.300:FF:000585 Structural maintenance of chromosomes 4
PIRSF PIRSF005719 SMC
PANTHER PTHR18937 STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
KEGG K06675 structural maintenance of chromosome 4
KOG KOG0996 Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C); [BD]
MapolyID Mapoly0189s0011 -
GO GO:0000799 condensin complex
GO GO:0005524 ATP binding
GO GO:0051276 chromosome organization
GO GO:0005515 protein binding
GO GO:0007076 mitotic chromosome condensation
GO GO:0016887 ATP hydrolysis activity
GO GO:0005694 chromosome

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC4 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06430.1 chr5:8538259..8548548 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.