Mp5g06430



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Coils Coil Coil
FunFam G3DSA:1.20.1060.20:FF:000003 Structural maintenance of chromosomes 4
Gene3D G3DSA:1.10.287.1490 -
FunFam G3DSA:3.40.50.300:FF:000481 Structural maintenance of chromosomes 4
SUPERFAMILY SSF75553 Smc hinge domain
Gene3D G3DSA:3.40.50.300 -
Pfam PF02463 RecF/RecN/SMC N terminal domain
Gene3D G3DSA:1.20.1060.20 -
Pfam PF06470 SMC proteins Flexible Hinge Domain
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00968 SMC_hinge_2
Gene3D G3DSA:3.30.70.1620 -
FunFam G3DSA:3.40.50.300:FF:000585 Structural maintenance of chromosomes 4
PIRSF PIRSF005719 SMC
PANTHER PTHR18937 STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
KEGG K06675 structural maintenance of chromosome 4
KOG KOG0996 Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C); [BD]
MapolyID Mapoly0189s0011 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC4 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06430.1 chr5:8538259..8548548 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.