Mp5g06550



Description

Annotation

Database ID Description
Gene3D G3DSA:1.20.58.2010 PRONE domain, subdomain 1
Pfam PF03759 PRONE (Plant-specific Rop nucleotide exchanger)
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.20.58.2010:FF:000003 Rop guanine nucleotide exchange factor 14
ProSiteProfiles PS51334 PRONE domain profile.
PANTHER PTHR33101 ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1
FunFam G3DSA:1.20.58.2010:FF:000001 Rop guanine nucleotide exchange factor 14
KOG KOG4020 Protein DRE2, required for cell viability; N-term missing; C-term missing; [S]
MapolyID Mapoly0171s0028 -
GO GO:0005085 guanyl-nucleotide exchange factor activity

Nomenclature

Gene symbol Product Transcript ID Status
MpKAR RopGEF Published
MpKARAPPO PRONE-type guanine nucleotide exchange factor for ROP GTPase, gemmae cup Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g06550.1 chr5:8701700..8707320 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g06550.2 chr5:8700389..8707285 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.