Mp5g08180



Description

Annotation

Database ID Description
SMART SM00028 tpr_5
Gene3D G3DSA:2.170.270.10 SET domain
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
SUPERFAMILY SSF82199 SET domain
SUPERFAMILY SSF48452 TPR-like
ProSiteProfiles PS50280 SET domain profile.
PANTHER PTHR47337 TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN
Pfam PF13181 Tetratricopeptide repeat
KEGG K24634 SET and MYND domain-containing protein 4 [EC:2.1.1.-]
KOG KOG0550 Molecular chaperone (DnaJ superfamily); N-term missing; C-term missing; [O]
KOG KOG2084 Predicted histone tail methylase containing SET domain; N-term missing; C-term missing; [B]
MapolyID Mapoly0086s0022 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR4 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g08180.1 chr5:11206711..11213640 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g08180.2 chr5:11206711..11213640 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g08180.3 chr5:11206799..11213628 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.