Mp5g09700



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PANTHER PTHR43977 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
FunFam G3DSA:3.40.50.300:FF:000424 Structural maintenance of chromosomes 3
Gene3D G3DSA:1.20.1060.20 -
CDD cd03272 ABC_SMC3_euk
Coils Coil Coil
SMART SM00968 SMC_hinge_2
Gene3D G3DSA:3.30.70.1620 -
SUPERFAMILY SSF75553 Smc hinge domain
Gene3D G3DSA:3.40.50.300 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF06470 SMC proteins Flexible Hinge Domain
FunFam G3DSA:3.40.50.300:FF:000370 Structural maintenance of chromosomes 3
PIRSF PIRSF005719 SMC
Pfam PF02463 RecF/RecN/SMC N terminal domain
KEGG K06669 structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
KOG KOG0964 Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3); [D]
MapolyID Mapoly0048s0100 -
GO GO:0005524 ATP binding
GO GO:0003690 double-stranded DNA binding
GO GO:0007064 mitotic sister chromatid cohesion
GO GO:0051276 chromosome organization
GO GO:0034990 mitotic cohesin complex
GO GO:0005515 protein binding
GO GO:0061775 cohesin loader activity
GO GO:0016887 ATP hydrolysis activity
GO GO:0005694 chromosome

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g09700.1 chr5:13142474..13155245 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.