Mp5g09700



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PANTHER PTHR43977 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
FunFam G3DSA:3.40.50.300:FF:000424 Structural maintenance of chromosomes 3
Gene3D G3DSA:1.20.1060.20 -
CDD cd03272 ABC_SMC3_euk
Coils Coil Coil
SMART SM00968 SMC_hinge_2
Gene3D G3DSA:3.30.70.1620 -
SUPERFAMILY SSF75553 Smc hinge domain
Gene3D G3DSA:3.40.50.300 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF06470 SMC proteins Flexible Hinge Domain
FunFam G3DSA:3.40.50.300:FF:000370 Structural maintenance of chromosomes 3
PIRSF PIRSF005719 SMC
Pfam PF02463 RecF/RecN/SMC N terminal domain
KEGG K06669 structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
KOG KOG0964 Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3); [D]
MapolyID Mapoly0048s0100 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC3 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g09700.1 chr5:13142474..13155245 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.