Mp5g09790



Description

Annotation

Database ID Description
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
Pfam PF00856 SET domain
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00317 set_7
CDD cd20071 SET_SMYD
SUPERFAMILY SSF82199 SET domain
Gene3D G3DSA:2.170.270.10 SET domain
ProSiteProfiles PS50280 SET domain profile.
SMART SM00028 tpr_5
ProSiteProfiles PS50005 TPR repeat profile.
Coils Coil Coil
SUPERFAMILY SSF48452 TPR-like
PANTHER PTHR47643 TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710)
KOG KOG0553 TPR repeat-containing protein; N-term missing; C-term missing; [R]
KOG KOG2084 Predicted histone tail methylase containing SET domain; C-term missing; [B]
MapolyID Mapoly0048s0091 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR5 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g09790.1 chr5:13384606..13392363 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g09790.2 chr5:13384606..13389183 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.