Mp5g10380



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR23079 RNA-DEPENDENT RNA POLYMERASE
Pfam PF05183 RNA dependent RNA polymerase
KEGG K11699 RNA-dependent RNA polymerase [EC:2.7.7.48]
KOG KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; N-term missing; [A]
MapolyID Mapoly0048s0033 -
GO GO:0031380 nuclear RNA-directed RNA polymerase complex
GO GO:0030422 siRNA processing
GO GO:0003968 RNA-dependent RNA polymerase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpRDR5/6-1 siRNA biogenesis, RNA-dependent RNA polymerase Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g10380.1 chr5:14074997..14083997 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g10380.2 chr5:14074997..14083997 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g10380.3 chr5:14074997..14083997 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.