Mp5g12520



Description

Annotation

Database ID Description
ProSiteProfiles PS50941 Chitin-binding type-1 domain profile.
SUPERFAMILY SSF51445 (Trans)glycosidases
PANTHER PTHR46476 CHITINASE 2-LIKE
PRINTS PR00451 Chitin-binding domain signature
ProSitePatterns PS00026 Chitin recognition or binding domain signature.
Gene3D G3DSA:3.20.20.80 Glycosidases
Pfam PF00187 Chitin recognition protein
Pfam PF00704 Glycosyl hydrolases family 18
Gene3D G3DSA:3.30.60.10 -
SMART SM00270 ChitinBD_3
FunFam G3DSA:3.30.60.10:FF:000001 Basic endochitinase
SUPERFAMILY SSF57016 Plant lectins/antimicrobial peptides
ProSiteProfiles PS51910 Glycosyl hydrolases family 18 (GH18) domain profile.
CDD cd00035 ChtBD1
KOG KOG2806 Chitinase; N-term missing; C-term missing; [G]
MapolyID Mapoly0092s0054 -
GO GO:0008061 chitin binding
GO GO:0005975 carbohydrate metabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpGH18.6 Cell wall related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g12520.1 chr5:16521234..16522696 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.