Mp5g17400



Description

Annotation

Database ID Description
SUPERFAMILY SSF90123 ABC transporter transmembrane region
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
FunFam G3DSA:3.40.50.300:FF:000205 ABC transporter B family member 4
ProSitePatterns PS00211 ABC transporters family signature.
CDD cd03249 ABC_MTABC3_MDL1_MDL2
PANTHER PTHR24222 ABC TRANSPORTER B FAMILY
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
Pfam PF00005 ABC transporter
Gene3D G3DSA:3.40.50.300 -
CDD cd18577 ABC_6TM_Pgp_ABCB1_D1_like
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd18578 ABC_6TM_Pgp_ABCB1_D2_like
FunFam G3DSA:3.40.50.300:FF:000251 ABC transporter B family member 19
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain
Pfam PF00664 ABC transporter transmembrane region
SMART SM00382 AAA_5
KEGG K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
KEGG K17907 autophagy-related protein 9
KOG KOG0055 Multidrug/pheromone exporter, ABC superfamily; [Q]
MapolyID Mapoly0182s0009 -
GO GO:0055085 transmembrane transport
GO GO:0042626 ATPase-coupled transmembrane transporter activity
GO GO:0005524 ATP binding
GO GO:0140359 ABC-type transporter activity
GO GO:0005887 plasma membrane
GO GO:0016887 ATP hydrolysis activity
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpABCB4 Auxin transport Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g17400.1 chr5:21589759..21598385 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.