Mp5g17980



Description

Annotation

Database ID Description
ProSiteProfiles PS50005 TPR repeat profile.
SUPERFAMILY SSF75304 Amidase signature (AS) enzymes
FunFam G3DSA:3.90.1300.10:FF:000004 Outer envelope protein 64, mitochondrial
SMART SM00028 tpr_5
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
PANTHER PTHR46310 AMIDASE 1
Pfam PF01425 Amidase
Gene3D G3DSA:3.90.1300.10 Amidase signature (AS) domain
Pfam PF13181 Tetratricopeptide repeat
ProSitePatterns PS00571 Amidases signature.
Pfam PF13414 TPR repeat
SUPERFAMILY SSF48452 TPR-like
KOG KOG1211 Amidases; [J]
KOG KOG0548 Molecular co-chaperone STI1; N-term missing; [O]
MapolyID Mapoly0084s0045 -

Nomenclature

Gene symbol Product Transcript ID Status
MpAMI1 transcription factor, Auxin related protein, Hormone related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g17980.1 chr5:22203345..22208891 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g17980.2 chr5:22203345..22208174 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.