Mp5g20500



Description

Annotation

Database ID Description
Gene3D G3DSA:2.130.10.10 -
SMART SM00800 uDENN_cls
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
Pfam PF02141 DENN (AEX-3) domain
Gene3D G3DSA:3.40.50.11500 -
PRINTS PR00320 G protein beta WD-40 repeat signature
ProSiteProfiles PS50211 Tripartite DENN domain profile.
SMART SM00320 WD40_4
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
Pfam PF00400 WD domain, G-beta repeat
SMART SM00801 dDENN_cls
Pfam PF03456 uDENN domain
SUPERFAMILY SSF50978 WD40 repeat-like
Gene3D G3DSA:3.30.450.200 -
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature.
PANTHER PTHR12296 DENN DOMAIN-CONTAINING PROTEIN 4
CDD cd00200 WD40
SMART SM00799 DENN_cls
KOG KOG0274 Cdc4 and related F-box and WD-40 proteins; N-term missing; [R]
KOG KOG3569 RAS signaling inhibitor ST5; [T]
KOG KOG0643 Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1); C-term missing; [JT]
MapolyID Mapoly0058s0028 -
GO GO:0031410 cytoplasmic vesicle
GO GO:0032483 regulation of Rab protein signal transduction
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpSCD Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g20500.1 chr5:25967321..25982658 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.