Mp5g21000



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00271 Helicase conserved C-terminal domain
SMART SM00487 ultradead3
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Pfam PF17981 Cysteine Rich ADD domain
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
PANTHER PTHR45797 RAD54-LIKE
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
SMART SM00490 helicmild6
Pfam PF00176 SNF2-related domain
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Coils Coil Coil
CDD cd18007 DEXHc_ATRX-like
Gene3D G3DSA:3.40.50.300 -
ProSiteProfiles PS51533 ADD domain profile.
CDD cd11726 ADDz_ATRX
CDD cd18793 SF2_C_SNF
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:3.40.50.10810 -
KEGG K10779 transcriptional regulator ATRX
KOG KOG1015 Transcription regulator XNP/ATRX, DEAD-box superfamily; [K]
MapolyID Mapoly0058s0081 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATRX Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21000.1 chr5:26496157..26525614 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g21000.2 chr5:26496157..26525614 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g21000.3 chr5:26496157..26525594 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.