Mp5g21580



Description

Annotation

Database ID Description
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
SUPERFAMILY SSF51445 (Trans)glycosidases
SUPERFAMILY SSF52279 Beta-D-glucan exohydrolase, C-terminal domain
Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain
PANTHER PTHR42721 SUGAR HYDROLASE-RELATED
Gene3D G3DSA:2.60.40.10 Immunoglobulins
SMART SM01217 Fn3_like_2
Gene3D G3DSA:3.20.20.300 -
FunFam G3DSA:3.40.50.1700:FF:000001 probable beta-D-xylosidase 2
Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain
Gene3D G3DSA:3.40.50.1700 -
KEGG K15920 xylan 1,4-beta-xylosidase [EC:3.2.1.37]
KEGG K05349 beta-glucosidase [EC:3.2.1.21]
MapolyID Mapoly0106s0041 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGH3.7 Cell wall related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21580.1 chr5:27589389..27595909 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g21580.2 chr5:27589389..27595909 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g21580.3 chr5:27590503..27595952 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.