Mp5g21860



Description

Annotation

Database ID Description
Pfam PF13646 HEAT repeats
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS50176 Armadillo/plakoglobin ARM repeat profile.
PRINTS PR00364 Disease resistance protein signature
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
SUPERFAMILY SSF48371 ARM repeat
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
SMART SM00382 AAA_5
SMART SM00567 E-Z type HEAT repeats
Gene3D G3DSA:1.25.10.10 -
Pfam PF00514 Armadillo/beta-catenin-like repeat
PANTHER PTHR47249 VACUOLAR PROTEIN 8
SUPERFAMILY SSF48452 TPR-like
Pfam PF00931 NB-ARC domain
SMART SM00185 arm_5
Gene3D G3DSA:3.40.50.300 -
KOG KOG0166 Karyopherin (importin) alpha; [U]
KOG KOG4224 Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting; [U]
KOG KOG0548 Molecular co-chaperone STI1; C-term missing; [O]
KOG KOG4658 Apoptotic ATPase; C-term missing; [T]
KOG KOG2038 CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein; N-term missing; [JK]
MapolyID Mapoly0106s0013 -
GO GO:0043495 protein-membrane adaptor activity
GO GO:0071562 nucleus-vacuole junction assembly
GO GO:0043531 ADP binding
GO GO:0005515 protein binding
GO GO:0016887 ATP hydrolysis activity

Nomenclature

Gene symbol Product Transcript ID Status
MpNBS-LRR17 NBS genes Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g21860.1 chr5:27913933..27922906 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g21860.2 chr5:27913933..27922906 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.