Mp5g22790



Description

Annotation

Database ID Description
ProSitePatterns PS00633 Bromodomain signature.
Coils Coil Coil
SMART SM00297 bromo_6
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50014 Bromodomain profile.
FunFam G3DSA:3.10.20.90:FF:000223 Transcription initiation factor TFIID subunit 1
Gene3D G3DSA:1.10.1100.10 -
SMART SM00213 ubq_7
PRINTS PR00503 Bromodomain signature
ProSiteProfiles PS50053 Ubiquitin domain profile.
SUPERFAMILY SSF47370 Bromodomain
SUPERFAMILY SSF54236 Ubiquitin-like
Gene3D G3DSA:3.10.20.90 -
PANTHER PTHR13900 TRANSCRIPTION INITIATION FACTOR TFIID
Pfam PF00439 Bromodomain
CDD cd17064 Ubl_TAFs_like
Pfam PF09247 TATA box-binding protein binding
Pfam PF12157 Protein of unknown function (DUF3591)
Gene3D G3DSA:1.20.920.10 -
SUPERFAMILY SSF47055 TAF(II)230 TBP-binding fragment
Pfam PF00240 Ubiquitin family
Pfam PF15288 Zinc knuckle
KEGG K03125 transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
KOG KOG0008 Transcription initiation factor TFIID, subunit TAF1; C-term missing; [K]
KOG KOG0008 Transcription initiation factor TFIID, subunit TAF1; N-term missing; [K]
MapolyID Mapoly0010s0177 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHAT5 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g22790.1 chr5:29079089..29098035 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.