Mp5g22890



Description

Annotation

Database ID Description
CDD cd00024 CD_CSD
PANTHER PTHR47240 CHROMO DOMAIN-CONTAINING PROTEIN LHP1
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00385 Chromo (CHRromatin Organisation MOdifier) domain
ProSitePatterns PS00598 Chromo domain signature.
SMART SM00298 chromo_7
Gene3D G3DSA:2.40.50.40 -
SUPERFAMILY SSF54160 Chromo domain-like
ProSiteProfiles PS50013 Chromo and chromo shadow domain profile.
KOG KOG2748 Uncharacterized conserved protein, contains chromo domain; C-term missing; [B]
MapolyID Mapoly0010s0167 -

Nomenclature

Gene symbol Product Transcript ID Status
MpLHP2 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g22890.1 chr5:29209805..29214262 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g22890.2 chr5:29209805..29214262 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.