Database | ID | Description |
---|---|---|
Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
PRINTS | PR00325 | Germin signature |
Pfam | PF00190 | Cupin |
SUPERFAMILY | SSF51182 | RmlC-like cupins |
PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
SMART | SM00835 | Cupin_1_3 |
CDD | cd02241 | cupin_OxOx |
MapolyID | Mapoly0010s0025 | - |
GO | GO:0030145 | manganese ion binding |
GO | GO:0005618 | cell wall |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpCupin93 | Cupin | Provisional |
Sequences: |
Gene UTR + CDS + intron |
>Mp5g24310.1 CACCCGCACC GGACATGGAA AGCCTGTCAA GTTGATCACG TTCCGTTCAC GACTGCGCCG ATTTACTTTT CCAAGGCGAT GCATGTGGGG CTTGCAAATT GACTCGAGGT CTTGTCCAAT ACAATGACAA TGCGGGTTTC AGGCTTGAGG CAATGCATGA CACCAAAGAA ATCAAGATCA TGGAATATAG TCACCACCGT AATTTTAGTC ATCATGCATT GCAGGTGGTT CACAAAGGCC TGCCATTGAC CACACTATCG GCGTCTTAGC TTCAGCACTT GAAGATGAGC AATAATTCAG CCCTCTTAGA TGGCTGAGAA ATTACACTAA AGGATTCAAA CGCAGTCAAA CGCGTTTATT GAAGCTGTGG ATCATAAGAC GAGCCTTACT CTCCTCTGTG CACCGGATTC GAGATTATAT TCTAAAACAT CTCTTTCTTG AAACGTGCTA TGAACTAAAC TTGTAGTGTA AAGACATTAT CAACAATCCT GAGGAGCTTT CGAGCAACAC ATCTATAAGA AGCTCAAGTT AAGAACAATA CCCTGGTCTA CTATGTCCTC TCAATAGCTA AAGAAAGCTT ACAACGCTTG CCTTAGCTTT CTAAGCTTTT TGTAGTGATT TCTGGCCACT TCAATCATGA CTCGCAGTCC AATCGCATTC GGGGTCTTTC TCTTCGGTTT GGTTTCGACG ATTGTGTTTG CTTCGGATCC TGAGCCAACG ACTGATTTTG TCCTTCCACG AGGTGTAGAC TCTGCGATTC TCGATGGCAA TTATTTCACC TCCACAATCC TGAGAAACGA CACAATGGGA TCAGGACCTT ACTCGACGAC GACCCAAGTC TCTGTTGAAA ATTTTCCAGC TCTACAAGGA TTGGGCATAT CCATGTCACT CGCTCGGTAT TCACCCGGAG CCGTTGTGAG ACCCCAAATA CATCCTCGGG CCACGGAGCT TCTCTACGTT TTGGAAGGAA CACTGGATGT GGGCTTTATC GACAGCACCA ACAAGTTGTT CAGGCAGACC CTCCAGACAG GGGATCTGTG GCTGGTGCCC CAGGGAATGG TTCACTTTCT CAGTAATCTC AACGACACCA GCGAAGCAAG GGCCGTGGCA GCATTCACCC GCTCAAATCC AGGGTATATT GATGTAGCTG CAAGTATTTT CGGATCGAAC GAGCGAATTT CGAAACAGGT CCTTTCCAAG TCCTTCAAGG TTTATGAAAG TGTCATACAA ACTCTGTTTG AAGCTCAAGA ACAAGAACCC ATCTCGAGCT CAGTGAGAGC TTCTCCGTGA ACTCAGTTGG CCGTTCTCAG ATGCAGCCTT TTTGTAACTC ATACTCAGAG TCACAAAAGA ATTCCCAACA ACCCTTTCAT CCACCAGCAG TATATATCCT CTGTAGTCTA GTTTATGCTT TGTGATCTGA CAAGAAGTTT GAAAGGAAGT ACGTTCAATA TCTTATTCAG CAGCTGAACT TCTCCAGCTA CTGTGTTTGA AAATGTCAAA ATTTTCAATT TTCAAACTCT GCTCACTTGT CGGACAACTT AGACTACGTT CACTTTACAA AAGCATTTGT AAATGTTGCT TGTGTCCGTT CGAAGGACTG CAGGTAGAAC ATTCAGATGA CTATTGGTCA CATCATCTGC TGAACAATTT TTTCGTCCG |
mRNA UTR + CDS |
>Mp5g24310.1 CACCCGCACC GGACATGGAA AGCCTGTCAA GTTGATCACG TTCCGTTCAC GACTGCGCCG ATTTACTTTT CCAAGGCGAT GCATGTGGGG CTTGCAAATT GACTCGAGGT CTTGTCCAAT ACAATGACAA TGCGGGTTTC AGGCTTGAGG CAATGCATGA CACCAAAGAA ATCAAGATCA TGGAATATAG TCACCACCGT AATTTTAGTC ATCATGCATT GCAGGTGGTT CACAAAGGCC TGCCATTGAC CACACTATCG GCGTCTTAGC TTCAGCACTT GAAGATGAGC AATAATTCAG CCCTCTTAGA TGGCTGAGAA ATTACACTAA AGGATTCAAA CGCAGTCAAA CGCGTTTATT GAAGCTGTGG ATCATAAGAC GAGCCTTACT CTCCTCTGTG CACCGGATTC GAGATTATAT TCTAAAACAT CTCTTTCTTG AAACGTGCTA TGAACTAAAC TTGTAGTGTA AAGACATTAT CAACAATCCT GAGGAGCTTT CGAGCAACAC ATCTATAAGA AGCTCAAGTT AAGAACAATA CCCTGGTCTA CTATGTCCTC TCAATAGCTA AAGAAAGCTT ACAACGCTTG CCTTAGCTTT CTAAGCTTTT TGTAGTGATT TCTGGCCACT TCAATCATGA CTCGCAGTCC AATCGCATTC GGGGTCTTTC TCTTCGGTTT GGTTTCGACG ATTGTGTTTG CTTCGGATCC TGAGCCAACG ACTGATTTTG TCCTTCCACG AGGTGTAGAC TCTGCGATTC TCGATGGCAA TTATTTCACC TCCACAATCC TGAGAAACGA CACAATGGGA TCAGGACCTT ACTCGACGAC GACCCAAGTC TCTGTTGAAA ATTTTCCAGC TCTACAAGGA TTGGGCATAT CCATGTCACT CGCTCGGTAT TCACCCGGAG CCGTTGTGAG ACCCCAAATA CATCCTCGGG CCACGGAGCT TCTCTACGTT TTGGAAGGAA CACTGGATGT GGGCTTTATC GACAGCACCA ACAAGTTGTT CAGGCAGACC CTCCAGACAG GGGATCTGTG GCTGGTGCCC CAGGGAATGG TTCACTTTCT CAGTAATCTC AACGACACCA GCGAAGCAAG GGCCGTGGCA GCATTCACCC GCTCAAATCC AGGGTATATT GATGTAGCTG CAAGTATTTT CGGATCGAAC GAGCGAATTT CGAAACAGGT CCTTTCCAAG TCCTTCAAGG TTTATGAAAG TGTCATACAA ACTCTGTTTG AAGCTCAAGA ACAAGAACCC ATCTCGAGCT CAGTGAGAGC TTCTCCGTGA ACTCAGTTGG CCGTTCTCAG ATGCAGCCTT TTTGTAACTC ATACTCAGAG TCACAAAAGA ATTCCCAACA ACCCTTTCAT CCACCAGCAG TATATATCCT CTGTAGTCTA GTTTATGCTT TGTGATCTGA CAAGAAGTTT GAAAGGAAGT ACGTTCAATA TCTTATTCAG CAGCTGAACT TCTCCAGCTA CTGTGTTTGA AAATGTCAAA ATTTTCAATT TTCAAACTCT GCTCACTTGT CGGACAACTT AGACTACGTT CACTTTACAA AAGCATTTGT AAATGTTGCT TGTGTCCGTT CGAAGGACTG CAGGTAGAAC ATTCAGATGA CTATTGGTCA CATCATCTGC TGAACAATTT TTTCGTCCG |
CDS |
>Mp5g24310.1 ATGACTCGCA GTCCAATCGC ATTCGGGGTC TTTCTCTTCG GTTTGGTTTC GACGATTGTG TTTGCTTCGG ATCCTGAGCC AACGACTGAT TTTGTCCTTC CACGAGGTGT AGACTCTGCG ATTCTCGATG GCAATTATTT CACCTCCACA ATCCTGAGAA ACGACACAAT GGGATCAGGA CCTTACTCGA CGACGACCCA AGTCTCTGTT GAAAATTTTC CAGCTCTACA AGGATTGGGC ATATCCATGT CACTCGCTCG GTATTCACCC GGAGCCGTTG TGAGACCCCA AATACATCCT CGGGCCACGG AGCTTCTCTA CGTTTTGGAA GGAACACTGG ATGTGGGCTT TATCGACAGC ACCAACAAGT TGTTCAGGCA GACCCTCCAG ACAGGGGATC TGTGGCTGGT GCCCCAGGGA ATGGTTCACT TTCTCAGTAA TCTCAACGAC ACCAGCGAAG CAAGGGCCGT GGCAGCATTC ACCCGCTCAA ATCCAGGGTA TATTGATGTA GCTGCAAGTA TTTTCGGATC GAACGAGCGA ATTTCGAAAC AGGTCCTTTC CAAGTCCTTC AAGGTTTATG AAAGTGTCAT ACAAACTCTG TTTGAAGCTC AAGAACAAGA ACCCATCTCG AGCTCAGTGA GAGCTTCTCC GTGA |
Protein |
>Mp5g24310.1 MTRSPIAFGV FLFGLVSTIV FASDPEPTTD FVLPRGVDSA ILDGNYFTST ILRNDTMGSG PYSTTTQVSV ENFPALQGLG ISMSLARYSP GAVVRPQIHP RATELLYVLE GTLDVGFIDS TNKLFRQTLQ TGDLWLVPQG MVHFLSNLND TSEARAVAAF TRSNPGYIDV AASIFGSNER ISKQVLSKSF KVYESVIQTL FEAQEQEPIS SSVRASP |