Mp6g03160



Description

Annotation

Database ID Description
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
SMART SM00249 PHD_3
FunFam G3DSA:2.30.30.490:FF:000019 Chromatin remodeling protein EBS
Pfam PF00628 PHD-finger
Gene3D G3DSA:2.30.30.490 -
CDD cd04714 BAH_BAHCC1
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
PANTHER PTHR46364 OS08G0421900 PROTEIN
SMART SM00439 BAH_4
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
ProSiteProfiles PS51038 BAH domain profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF01426 BAH domain
KEGG K25868 chromatin remodeling protein
KOG KOG1886 BAH domain proteins; C-term missing; [K]
KOG KOG1632 Uncharacterized PHD Zn-finger protein; C-term missing; [R]
MapolyID Mapoly0035s0096 -
GO GO:0003682 chromatin binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHAT13 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g03160.1 chr6:4301652..4315084 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g03160.2 chr6:4301748..4315084 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g03160.3 chr6:4301652..4315084 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.