Mp6g06120



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00490 helicmild6
SMART SM00487 ultradead3
Gene3D G3DSA:3.40.50.10810 -
CDD cd18004 DEXHc_RAD54
FunFam G3DSA:3.40.50.10810:FF:000020 DNA repair and recombination protein RAD54B
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Pfam PF00176 SNF2-related domain
Pfam PF00271 Helicase conserved C-terminal domain
PANTHER PTHR45629 SNF2/RAD54 FAMILY MEMBER
Gene3D G3DSA:3.40.50.300 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:1.20.120.850 -
CDD cd18793 SF2_C_SNF
KEGG K10877 DNA repair and recombination protein RAD54B [EC:5.6.2.-]
KOG KOG0390 DNA repair protein, SNF2 family; N-term missing; [L]
MapolyID Mapoly0097s0032 -
GO GO:0005634 nucleus
GO GO:0007131 reciprocal meiotic recombination
GO GO:0005524 ATP binding
GO GO:0015616 DNA translocase activity
GO GO:0140658 ATP-dependent chromatin remodeler activity
GO GO:0000724 double-strand break repair via homologous recombination

Nomenclature

Gene symbol Product Transcript ID Status
MpRAD54 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g06120.1 chr6:7439059..7447545 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.