Mp6g15200



Description

Annotation

Database ID Description
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd21134 YTH
Pfam PF04146 YT521-B-like domain
Gene3D G3DSA:3.10.590.10 ph1033 like domains
ProSiteProfiles PS50882 YTH domain profile.
FunFam G3DSA:4.10.1000.10:FF:000017 Cleavage and polyadenylation specificity factor 30 kDa subunit
SMART SM00356 c3hfinal6
Gene3D G3DSA:4.10.1000.10 -
PANTHER PTHR12357 YTH YT521-B HOMOLOGY DOMAIN-CONTAINING
SUPERFAMILY SSF90229 CCCH zinc finger
KEGG K14404 cleavage and polyadenylation specificity factor subunit 4
KOG KOG1902 Putative signal transduction protein involved in RNA splicing; [TA]
KOG KOG1040 Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit); C-term missing; [A]
MapolyID Mapoly0056s0030 -
GO GO:0048024 regulation of mRNA splicing, via spliceosome
GO GO:0005654 nucleoplasm
GO GO:0003723 RNA binding
GO GO:0046872 metal ion binding
GO GO:1990247 N6-methyladenosine-containing RNA reader activity
GO GO:0000398 mRNA splicing, via spliceosome
GO GO:0003729 mRNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H24 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g15200.1 chr6:19440810..19445740 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.