Mp6g16570



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR10887 DNA2/NAM7 HELICASE FAMILY
Pfam PF13087 AAA domain
FunFam G3DSA:3.40.50.300:FF:000507 Pre-mRNA-splicing factor
Pfam PF21143 Intron-binding protein aquarius, beta-barrel
Pfam PF13086 AAA domain
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd18808 SF1_C_Upf1
CDD cd17935 EEXXQc_AQR
Pfam PF21144 Intron-binding protein aquarius insert domain
PIRSF PIRSF038901 AQR_cwf11
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF16399 Intron-binding protein aquarius N-terminal
KEGG K12874 intron-binding protein aquarius
KOG KOG1806 DEAD box containing helicases; [L]
MapolyID Mapoly0170s0020 -
GO GO:0004386 helicase activity
GO GO:0071013 catalytic step 2 spliceosome
GO GO:0000398 mRNA splicing, via spliceosome
GO GO:0003729 mRNA binding
GO GO:0005681 spliceosomal complex

Nomenclature

Gene symbol Product Transcript ID Status
MpEMB2765 DEAD box containing helicase Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g16570.1 chr6:21041342..21050686 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.