Mp6g16850



Description

Annotation

Database ID Description
CDD cd03223 ABCD_peroxisomal_ALDP
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00211 ABC transporters family signature.
PANTHER PTHR11384 ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER
Pfam PF06472 ABC transporter transmembrane region 2
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
Gene3D G3DSA:3.40.50.300 -
SMART SM00382 AAA_5
SUPERFAMILY SSF90123 ABC transporter transmembrane region
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain
Pfam PF00005 ABC transporter
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
KEGG K25819 ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:7.6.2.4]
KOG KOG0060 Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [IR]
MapolyID Mapoly0144s0028 -
GO GO:0055085 transmembrane transport
GO GO:0042626 ATPase-coupled transmembrane transporter activity
GO GO:0007031 peroxisome organization
GO GO:0042760 very long-chain fatty acid catabolic process
GO GO:0005524 ATP binding
GO GO:0006635 fatty acid beta-oxidation
GO GO:0140359 ABC-type transporter activity
GO GO:0015910 long-chain fatty acid import into peroxisome
GO GO:0016887 ATP hydrolysis activity
GO GO:0005778 peroxisomal membrane
GO GO:0005324 long-chain fatty acid transmembrane transporter activity
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpABCD1 ABC transporters Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g16850.1 chr6:21605979..21618795 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.