Mp6g18490



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02985 HEAT repeat
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Coils Coil Coil
Pfam PF12054 Domain of unknown function (DUF3535)
Gene3D G3DSA:1.25.10.10 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.300 -
CDD cd17999 DEXHc_Mot1
SMART SM00490 helicmild6
SUPERFAMILY SSF48371 ARM repeat
ProSiteProfiles PS50077 HEAT repeat profile.
Pfam PF00176 SNF2-related domain
FunFam G3DSA:3.40.50.300:FF:000428 TATA-binding protein-associated factor 172
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
SMART SM00487 ultradead3
CDD cd18793 SF2_C_SNF
PANTHER PTHR36498 TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172
FunFam G3DSA:3.40.50.10810:FF:000009 B-TFIID TATA-box-binding protein-associated factor 1
KEGG K15192 TATA-binding protein-associated factor [EC:5.6.2.-]
KOG KOG0392 SNF2 family DNA-dependent ATPase domain-containing protein; [K]
MapolyID Mapoly0038s0059 -
GO GO:0005524 ATP binding
GO GO:0017025 TBP-class protein binding
GO GO:0005515 protein binding
GO GO:0140658 ATP-dependent chromatin remodeler activity
GO GO:0016887 ATP hydrolysis activity
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.19 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g18490.1 chr6:24667325..24684412 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18490.2 chr6:24667325..24684397 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.