Mp6g18570



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF12624 VPS13-like, N-terminal
Pfam PF13329 Autophagy-related protein 2, middle RBG modules
PANTHER PTHR13190 AUTOPHAGY-RELATED 2, ISOFORM A
Coils Coil Coil
Pfam PF09333 ATG2/VPS13, C terminal domain
KEGG K17906 autophagy-related protein 2
KOG KOG2993 Cytoplasm to vacuole targeting protein; N-term missing; [U]
KOG KOG1809 Vacuolar protein sorting-associated protein; C-term missing; [U]
MapolyID Mapoly0038s0067 -
GO GO:0032266 phosphatidylinositol-3-phosphate binding
GO GO:0000045 autophagosome assembly
GO GO:0061709 reticulophagy
GO GO:0044805 obsolete late nucleophagy
GO GO:0006914 autophagy
GO GO:0034727 piecemeal microautophagy of the nucleus
GO GO:0000422 autophagy of mitochondrion
GO GO:0000407 phagophore assembly site

Nomenclature

Gene symbol Product Transcript ID Status
MpATG2 Autophagy protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g18570.1 chr6:24750931..24765082 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18570.2 chr6:24750931..24765082 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18570.3 chr6:24751035..24765082 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18570.4 chr6:24751035..24765082 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.